Gene : Araha.3358s0005 A. halleri v1.1
Defline:  (1 of 3) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  5
Name:  ? Araha.3358s0005 Secondary Identifier:  ? PAC:28839639
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1001 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3358s0005 0.5kb upstream 0.5kb upstream 4805 true Scaffold3358: 27469-32273 Arabidopsis halleri
Araha.3358s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3358: 27469-27968 Arabidopsis halleri
Araha.3358s0005 0.5kb downstream 0.5kb downstream 4805 true Scaffold3358: 27969-32773 Arabidopsis halleri
Araha.3358s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3358: 32274-32773 Arabidopsis halleri
Araha.3358s0005 1.0kb upstream 1.0kb upstream 5305 true Scaffold3358: 26969-32273 Arabidopsis halleri
Araha.3358s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3358: 26969-27968 Arabidopsis halleri
Araha.3358s0005 1.0kb downstream 1.0kb downstream 5305 true Scaffold3358: 27969-33273 Arabidopsis halleri
Araha.3358s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3358: 32274-33273 Arabidopsis halleri
Araha.3358s0005 2.0kb upstream 2.0kb upstream 6305 true Scaffold3358: 25969-32273 Arabidopsis halleri
Araha.3358s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3358: 25969-27968 Arabidopsis halleri
Araha.3358s0005 2.0kb downstream 2.0kb downstream 6305 true Scaffold3358: 27969-34273 Arabidopsis halleri
Araha.3358s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3358: 32274-34273 Arabidopsis halleri
Araha.3358s0005 5.0kb upstream 5.0kb upstream 9305 true Scaffold3358: 22969-32273 Arabidopsis halleri
Araha.3358s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3358: 22969-27968 Arabidopsis halleri
Araha.3358s0005 5.0kb downstream 5.0kb downstream 9305 true Scaffold3358: 27969-37273 Arabidopsis halleri
Araha.3358s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3358: 32274-37273 Arabidopsis halleri
Araha.3358s0005 10.0kb upstream 10.0kb upstream 14305 true Scaffold3358: 17969-32273 Arabidopsis halleri
Araha.3358s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3358: 17969-27968 Arabidopsis halleri
Araha.3358s0005 10.0kb downstream 10.0kb downstream 14305 true Scaffold3358: 27969-42273 Arabidopsis halleri
Araha.3358s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3358: 32274-42273 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377822 5261 Brassicaceae View MSA
123840606 5264 Brassicales-Malvales View MSA
124346924 5266 SBM View MSA
124240954 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain