Gene : Araha.3224s0010 A. halleri v1.1
Defline:  (1 of 5) 6.1.1.11 - Serine--tRNA ligase / Seryl-tRNA synthetase Genomic Order:  10
Name:  ? Araha.3224s0010 Secondary Identifier:  ? PAC:28839032
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3224s0010 0.5kb upstream 0.5kb upstream 2910 true Scaffold3224: 35833-38742 Arabidopsis halleri
Araha.3224s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3224: 38243-38742 Arabidopsis halleri
Araha.3224s0010 0.5kb downstream 0.5kb downstream 2910 true Scaffold3224: 35333-38242 Arabidopsis halleri
Araha.3224s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3224: 35333-35832 Arabidopsis halleri
Araha.3224s0010 1.0kb upstream 1.0kb upstream 3410 true Scaffold3224: 35833-39242 Arabidopsis halleri
Araha.3224s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3224: 38243-39242 Arabidopsis halleri
Araha.3224s0010 1.0kb downstream 1.0kb downstream 3410 true Scaffold3224: 34833-38242 Arabidopsis halleri
Araha.3224s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3224: 34833-35832 Arabidopsis halleri
Araha.3224s0010 2.0kb upstream 2.0kb upstream 4410 true Scaffold3224: 35833-40242 Arabidopsis halleri
Araha.3224s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3224: 38243-40242 Arabidopsis halleri
Araha.3224s0010 2.0kb downstream 2.0kb downstream 4410 true Scaffold3224: 33833-38242 Arabidopsis halleri
Araha.3224s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3224: 33833-35832 Arabidopsis halleri
Araha.3224s0010 5.0kb upstream 5.0kb upstream 7410 true Scaffold3224: 35833-43242 Arabidopsis halleri
Araha.3224s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3224: 38243-43242 Arabidopsis halleri
Araha.3224s0010 5.0kb downstream 5.0kb downstream 7410 true Scaffold3224: 30833-38242 Arabidopsis halleri
Araha.3224s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3224: 30833-35832 Arabidopsis halleri
Araha.3224s0010 10.0kb upstream 10.0kb upstream 12410 true Scaffold3224: 35833-48242 Arabidopsis halleri
Araha.3224s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3224: 38243-48242 Arabidopsis halleri
Araha.3224s0010 10.0kb downstream 10.0kb downstream 12410 true Scaffold3224: 25833-38242 Arabidopsis halleri
Araha.3224s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3224: 25833-35832 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374239 5261 Brassicaceae View MSA
123836475 5264 Brassicales-Malvales View MSA
124340447 5266 SBM View MSA
124237440 5268 Malvidae View MSA
124063833 5270 Rosid View MSA
123738536 5271 Pentapetalae View MSA
122786779 5272 Eudicot View MSA
122041756 5273 Angiosperm View MSA
121347508 5274 Embryophyte View MSA
123423893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain