Gene : Araha.3449s0009 A. halleri v1.1
Defline:  (1 of 1) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  9
Name:  ? Araha.3449s0009 Secondary Identifier:  ? PAC:28862291
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5837 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3449s0009 0.5kb upstream 0.5kb upstream 2245 true Scaffold3449: 46853-49097 Arabidopsis halleri
Araha.3449s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3449: 46853-47352 Arabidopsis halleri
Araha.3449s0009 0.5kb downstream 0.5kb downstream 2245 true Scaffold3449: 47353-49597 Arabidopsis halleri
Araha.3449s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3449: 49098-49597 Arabidopsis halleri
Araha.3449s0009 1.0kb upstream 1.0kb upstream 2745 true Scaffold3449: 46353-49097 Arabidopsis halleri
Araha.3449s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3449: 46353-47352 Arabidopsis halleri
Araha.3449s0009 1.0kb downstream 1.0kb downstream 2745 true Scaffold3449: 47353-50097 Arabidopsis halleri
Araha.3449s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3449: 49098-50097 Arabidopsis halleri
Araha.3449s0009 2.0kb upstream 2.0kb upstream 3745 true Scaffold3449: 45353-49097 Arabidopsis halleri
Araha.3449s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3449: 45353-47352 Arabidopsis halleri
Araha.3449s0009 2.0kb downstream 2.0kb downstream 3745 true Scaffold3449: 47353-51097 Arabidopsis halleri
Araha.3449s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3449: 49098-51097 Arabidopsis halleri
Araha.3449s0009 5.0kb upstream 5.0kb upstream 6745 true Scaffold3449: 42353-49097 Arabidopsis halleri
Araha.3449s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3449: 42353-47352 Arabidopsis halleri
Araha.3449s0009 5.0kb downstream 5.0kb downstream 6745 true Scaffold3449: 47353-54097 Arabidopsis halleri
Araha.3449s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3449: 49098-54097 Arabidopsis halleri
Araha.3449s0009 10.0kb upstream 10.0kb upstream 11745 true Scaffold3449: 37353-49097 Arabidopsis halleri
Araha.3449s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3449: 37353-47352 Arabidopsis halleri
Araha.3449s0009 10.0kb downstream 10.0kb downstream 11745 true Scaffold3449: 47353-59097 Arabidopsis halleri
Araha.3449s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3449: 49098-59097 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365259 5261 Brassicaceae View MSA
123830601 5264 Brassicales-Malvales View MSA
124337572 5266 SBM View MSA
124237230 5268 Malvidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain