Gene : Araha.3696s0016 A. halleri v1.1

Defline:  (1 of 11) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) Genomic Order:  16
Name:  ? Araha.3696s0016 Secondary Identifier:  ? PAC:28847169

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3696s0016 0.5kb upstream 0.5kb upstream 1454 true Scaffold3696: 74995-76448 Arabidopsis halleri
Araha.3696s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3696: 74995-75494 Arabidopsis halleri
Araha.3696s0016 0.5kb downstream 0.5kb downstream 1454 true Scaffold3696: 75495-76948 Arabidopsis halleri
Araha.3696s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3696: 76449-76948 Arabidopsis halleri
Araha.3696s0016 1.0kb upstream 1.0kb upstream 1954 true Scaffold3696: 74495-76448 Arabidopsis halleri
Araha.3696s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3696: 74495-75494 Arabidopsis halleri
Araha.3696s0016 1.0kb downstream 1.0kb downstream 1954 true Scaffold3696: 75495-77448 Arabidopsis halleri
Araha.3696s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3696: 76449-77448 Arabidopsis halleri
Araha.3696s0016 2.0kb upstream 2.0kb upstream 2954 true Scaffold3696: 73495-76448 Arabidopsis halleri
Araha.3696s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3696: 73495-75494 Arabidopsis halleri
Araha.3696s0016 2.0kb downstream 2.0kb downstream 2954 true Scaffold3696: 75495-78448 Arabidopsis halleri
Araha.3696s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3696: 76449-78448 Arabidopsis halleri
Araha.3696s0016 5.0kb upstream 5.0kb upstream 5954 true Scaffold3696: 70495-76448 Arabidopsis halleri
Araha.3696s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3696: 70495-75494 Arabidopsis halleri
Araha.3696s0016 5.0kb downstream 5.0kb downstream 5954 true Scaffold3696: 75495-81448 Arabidopsis halleri
Araha.3696s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3696: 76449-81448 Arabidopsis halleri
Araha.3696s0016 10.0kb upstream 10.0kb upstream 10954 true Scaffold3696: 65495-76448 Arabidopsis halleri
Araha.3696s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3696: 65495-75494 Arabidopsis halleri
Araha.3696s0016 10.0kb downstream 10.0kb downstream 10954 true Scaffold3696: 75495-86448 Arabidopsis halleri
Araha.3696s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3696: 76449-86448 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380092 5261 Brassicaceae View MSA
123827526 5264 Brassicales-Malvales View MSA
124343426 5266 SBM View MSA
124243388 5268 Malvidae View MSA
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain