Protein Family : 60S acidic ribosomal protein family 124343426

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  22

22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g033353m.g (1 of 7) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) C. sinensis v1.1 1367   scaffold00422: 107791-109157
AT4G25890 (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A. thaliana TAIR10 1012   Chr4: 13159484-13160495
AT5G57290 (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A. thaliana TAIR10 1125   Chr5: 23206802-23207926
Thhalv10015037m.g (1 of 15) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) E. salsugineum v1.0 1002   scaffold_2: 9348218-9349219
Ciclev10002863m.g (1 of 7) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) C. clementina v1.0 1337   scaffold_5: 21229072-21230408
Gorai.009G003400 (1 of 17) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) G. raimondii v2.1 1425   Chr09: 318170-319594
Thecc1EG004261 (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) T. cacao v1.1 1045   scaffold_1: 30555555-30556599
Thecc1EG004574 (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) T. cacao v1.1 1145   scaffold_1: 32367537-32368681
Thecc1EG009860 (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) T. cacao v1.1 11505   scaffold_2: 28240523-28252027
Thecc1EG039317 (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) T. cacao v1.1 5599   scaffold_9: 18125380-18130978
Araha.3696s0016 (1 of 11) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) A. halleri v1.1 954   Scaffold3696: 75495-76448
Araha.4249s0017 (1 of 11) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) A. halleri v1.1 1042   Scaffold4249: 75562-76603
Cagra.2848s0012 (1 of 4) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) C. grandiflora v1.1 1117   Scaffold2848: 40531-41647
Cagra.3467s0028 (1 of 8) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) C. grandiflora v1.1 974   Scaffold3467: 82511-83484
Brara.B01223 (1 of 19) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) B. rapa FPsc v1.3 761   A02: 6219884-6220644
Brara.J01152 (1 of 19) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) B. rapa FPsc v1.3 779   A10: 10948412-10949190
Bostr.26833s0528 (1 of 12) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) B. stricta v1.2 1148   Scaffold26833: 2755635-2756782
Bostr.7867s0409 (1 of 12) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) B. stricta v1.2 1044   Scaffold7867: 2100170-2101213
AL7G27120 (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A. lyrata v2.1 1059   scaffold_7: 6918915-6919973
AL8G33260 (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A. lyrata v2.1 1032   scaffold_8: 18029442-18030473
Carub.0008s1780 (1 of 4) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) C. rubella v1.1 1037   scaffold_8: 9370940-9371976
Carub.0007s1506 (1 of 4) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) C. rubella v1.1 900   scaffold_7: 5623418-5624317

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT4G25890.1 A. thaliana TAIR10 124343426 60S acidic ribosomal protein family 2 5266 SBM
AT5G57290.1 A. thaliana TAIR10 124343426 60S acidic ribosomal protein family 2 5266 SBM
Cagra.2848s0012.1.p C. grandiflora v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
Bostr.26833s0528.1.p B. stricta v1.2 124343426 60S acidic ribosomal protein family 2 5266 SBM
Bostr.7867s0409.1.p B. stricta v1.2 124343426 60S acidic ribosomal protein family 2 5266 SBM
Carub.0007s1506.1.p C. rubella v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
Carub.0008s1780.1.p C. rubella v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
orange1.1g033353m C. sinensis v1.1 124343426 60S acidic ribosomal protein family 1 5266 SBM
Thhalv10015037m E. salsugineum v1.0 124343426 60S acidic ribosomal protein family 1 5266 SBM
Ciclev10002863m C. clementina v1.0 124343426 60S acidic ribosomal protein family 1 5266 SBM
Gorai.009G003400.1 G. raimondii v2.1 124343426 60S acidic ribosomal protein family 1 5266 SBM
Thecc1EG039317t1 T. cacao v1.1 124343426 60S acidic ribosomal protein family 4 5266 SBM
Thecc1EG004261t1 T. cacao v1.1 124343426 60S acidic ribosomal protein family 4 5266 SBM
Thecc1EG004574t1 T. cacao v1.1 124343426 60S acidic ribosomal protein family 4 5266 SBM
Thecc1EG009860t1 T. cacao v1.1 124343426 60S acidic ribosomal protein family 4 5266 SBM
Araha.4249s0017.1.p A. halleri v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
Araha.3696s0016.1.p A. halleri v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
Cagra.3467s0028.1.p C. grandiflora v1.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
Brara.J01152.1.p B. rapa FPsc v1.3 124343426 60S acidic ribosomal protein family 2 5266 SBM
Brara.B01223.1.p B. rapa FPsc v1.3 124343426 60S acidic ribosomal protein family 2 5266 SBM
AL8G33260.t1 A. lyrata v2.1 124343426 60S acidic ribosomal protein family 2 5266 SBM
AL7G27120.t1 A. lyrata v2.1 124343426 60S acidic ribosomal protein family 2 5266 SBM