Gene : Thecc1EG004261 T. cacao v1.1
Defline:  (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2690
Name:  ? Thecc1EG004261 Secondary Identifier:  ? PAC:27435729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004261 0.5kb upstream 0.5kb upstream 1545 true scaffold_1: 30555555-30557099 Theobroma cacao
Thecc1EG004261 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 30556600-30557099 Theobroma cacao
Thecc1EG004261 0.5kb downstream 0.5kb downstream 1545 true scaffold_1: 30555055-30556599 Theobroma cacao
Thecc1EG004261 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 30555055-30555554 Theobroma cacao
Thecc1EG004261 1.0kb upstream 1.0kb upstream 2045 true scaffold_1: 30555555-30557599 Theobroma cacao
Thecc1EG004261 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 30556600-30557599 Theobroma cacao
Thecc1EG004261 1.0kb downstream 1.0kb downstream 2045 true scaffold_1: 30554555-30556599 Theobroma cacao
Thecc1EG004261 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 30554555-30555554 Theobroma cacao
Thecc1EG004261 2.0kb upstream 2.0kb upstream 3045 true scaffold_1: 30555555-30558599 Theobroma cacao
Thecc1EG004261 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 30556600-30558599 Theobroma cacao
Thecc1EG004261 2.0kb downstream 2.0kb downstream 3045 true scaffold_1: 30553555-30556599 Theobroma cacao
Thecc1EG004261 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 30553555-30555554 Theobroma cacao
Thecc1EG004261 5.0kb upstream 5.0kb upstream 6045 true scaffold_1: 30555555-30561599 Theobroma cacao
Thecc1EG004261 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 30556600-30561599 Theobroma cacao
Thecc1EG004261 5.0kb downstream 5.0kb downstream 6045 true scaffold_1: 30550555-30556599 Theobroma cacao
Thecc1EG004261 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 30550555-30555554 Theobroma cacao
Thecc1EG004261 10.0kb upstream 10.0kb upstream 11045 true scaffold_1: 30555555-30566599 Theobroma cacao
Thecc1EG004261 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 30556600-30566599 Theobroma cacao
Thecc1EG004261 10.0kb downstream 10.0kb downstream 11045 true scaffold_1: 30545555-30556599 Theobroma cacao
Thecc1EG004261 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 30545555-30555554 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827526 5264 Brassicales-Malvales View MSA
124343426 5266 SBM View MSA
124243388 5268 Malvidae View MSA
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain