Gene : Thecc1EG004574 T. cacao v1.1
Defline:  (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2928
Name:  ? Thecc1EG004574 Secondary Identifier:  ? PAC:27435190
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004574 0.5kb upstream 0.5kb upstream 1645 true scaffold_1: 32367037-32368681 Theobroma cacao
Thecc1EG004574 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32367037-32367536 Theobroma cacao
Thecc1EG004574 0.5kb downstream 0.5kb downstream 1645 true scaffold_1: 32367537-32369181 Theobroma cacao
Thecc1EG004574 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32368682-32369181 Theobroma cacao
Thecc1EG004574 1.0kb upstream 1.0kb upstream 2145 true scaffold_1: 32366537-32368681 Theobroma cacao
Thecc1EG004574 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32366537-32367536 Theobroma cacao
Thecc1EG004574 1.0kb downstream 1.0kb downstream 2145 true scaffold_1: 32367537-32369681 Theobroma cacao
Thecc1EG004574 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32368682-32369681 Theobroma cacao
Thecc1EG004574 2.0kb upstream 2.0kb upstream 3145 true scaffold_1: 32365537-32368681 Theobroma cacao
Thecc1EG004574 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32365537-32367536 Theobroma cacao
Thecc1EG004574 2.0kb downstream 2.0kb downstream 3145 true scaffold_1: 32367537-32370681 Theobroma cacao
Thecc1EG004574 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32368682-32370681 Theobroma cacao
Thecc1EG004574 5.0kb upstream 5.0kb upstream 6145 true scaffold_1: 32362537-32368681 Theobroma cacao
Thecc1EG004574 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32362537-32367536 Theobroma cacao
Thecc1EG004574 5.0kb downstream 5.0kb downstream 6145 true scaffold_1: 32367537-32373681 Theobroma cacao
Thecc1EG004574 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32368682-32373681 Theobroma cacao
Thecc1EG004574 10.0kb upstream 10.0kb upstream 11145 true scaffold_1: 32357537-32368681 Theobroma cacao
Thecc1EG004574 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32357537-32367536 Theobroma cacao
Thecc1EG004574 10.0kb downstream 10.0kb downstream 11145 true scaffold_1: 32367537-32378681 Theobroma cacao
Thecc1EG004574 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32368682-32378681 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827526 5264 Brassicales-Malvales View MSA
124343426 5266 SBM View MSA
124243388 5268 Malvidae View MSA
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain