Gene : Thecc1EG009860 T. cacao v1.1
Defline:  (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2291
Name:  ? Thecc1EG009860 Secondary Identifier:  ? PAC:27459669
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009860 0.5kb upstream 0.5kb upstream 12005 true scaffold_2: 28240023-28252027 Theobroma cacao
Thecc1EG009860 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 28240023-28240522 Theobroma cacao
Thecc1EG009860 0.5kb downstream 0.5kb downstream 12005 true scaffold_2: 28240523-28252527 Theobroma cacao
Thecc1EG009860 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 28252028-28252527 Theobroma cacao
Thecc1EG009860 1.0kb upstream 1.0kb upstream 12505 true scaffold_2: 28239523-28252027 Theobroma cacao
Thecc1EG009860 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 28239523-28240522 Theobroma cacao
Thecc1EG009860 1.0kb downstream 1.0kb downstream 12505 true scaffold_2: 28240523-28253027 Theobroma cacao
Thecc1EG009860 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 28252028-28253027 Theobroma cacao
Thecc1EG009860 2.0kb upstream 2.0kb upstream 13505 true scaffold_2: 28238523-28252027 Theobroma cacao
Thecc1EG009860 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 28238523-28240522 Theobroma cacao
Thecc1EG009860 2.0kb downstream 2.0kb downstream 13505 true scaffold_2: 28240523-28254027 Theobroma cacao
Thecc1EG009860 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 28252028-28254027 Theobroma cacao
Thecc1EG009860 5.0kb upstream 5.0kb upstream 16505 true scaffold_2: 28235523-28252027 Theobroma cacao
Thecc1EG009860 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 28235523-28240522 Theobroma cacao
Thecc1EG009860 5.0kb downstream 5.0kb downstream 16505 true scaffold_2: 28240523-28257027 Theobroma cacao
Thecc1EG009860 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 28252028-28257027 Theobroma cacao
Thecc1EG009860 10.0kb upstream 10.0kb upstream 21505 true scaffold_2: 28230523-28252027 Theobroma cacao
Thecc1EG009860 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 28230523-28240522 Theobroma cacao
Thecc1EG009860 10.0kb downstream 10.0kb downstream 21505 true scaffold_2: 28240523-28262027 Theobroma cacao
Thecc1EG009860 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 28252028-28262027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827526 5264 Brassicales-Malvales View MSA
124343426 5266 SBM View MSA
124243388 5268 Malvidae View MSA
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain