Gene : Araha.3864s0007 A. halleri v1.1

Defline:  (1 of 2) PTHR12416:SF2 - RRNA-PROCESSING PROTEIN FCF1 HOMOLOG Genomic Order:  7
Name:  ? Araha.3864s0007 Secondary Identifier:  ? PAC:28861864

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3864s0007 0.5kb upstream 0.5kb upstream 2293 true Scaffold3864: 21939-24231 Arabidopsis halleri
Araha.3864s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold3864: 23732-24231 Arabidopsis halleri
Araha.3864s0007 0.5kb downstream 0.5kb downstream 2293 true Scaffold3864: 21439-23731 Arabidopsis halleri
Araha.3864s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold3864: 21439-21938 Arabidopsis halleri
Araha.3864s0007 1.0kb upstream 1.0kb upstream 2793 true Scaffold3864: 21939-24731 Arabidopsis halleri
Araha.3864s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold3864: 23732-24731 Arabidopsis halleri
Araha.3864s0007 1.0kb downstream 1.0kb downstream 2793 true Scaffold3864: 20939-23731 Arabidopsis halleri
Araha.3864s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold3864: 20939-21938 Arabidopsis halleri
Araha.3864s0007 2.0kb upstream 2.0kb upstream 3793 true Scaffold3864: 21939-25731 Arabidopsis halleri
Araha.3864s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold3864: 23732-25731 Arabidopsis halleri
Araha.3864s0007 2.0kb downstream 2.0kb downstream 3793 true Scaffold3864: 19939-23731 Arabidopsis halleri
Araha.3864s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold3864: 19939-21938 Arabidopsis halleri
Araha.3864s0007 5.0kb upstream 5.0kb upstream 6793 true Scaffold3864: 21939-28731 Arabidopsis halleri
Araha.3864s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold3864: 23732-28731 Arabidopsis halleri
Araha.3864s0007 5.0kb downstream 5.0kb downstream 6793 true Scaffold3864: 16939-23731 Arabidopsis halleri
Araha.3864s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold3864: 16939-21938 Arabidopsis halleri
Araha.3864s0007 10.0kb upstream 10.0kb upstream 11793 true Scaffold3864: 21939-33731 Arabidopsis halleri
Araha.3864s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold3864: 23732-33731 Arabidopsis halleri
Araha.3864s0007 10.0kb downstream 10.0kb downstream 11793 true Scaffold3864: 11939-23731 Arabidopsis halleri
Araha.3864s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold3864: 11939-21938 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493019 5273 Angiosperm View MSA
122328116 5261 Brassicaceae View MSA
123769496 5264 Brassicales-Malvales View MSA
124268056 5266 SBM View MSA
124124317 5268 Malvidae View MSA
123853370 5270 Rosid View MSA
123439457 5271 Pentapetalae View MSA
122475053 5272 Eudicot View MSA
120766395 5274 Embryophyte View MSA
122808802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain