Gene : Araha.3842s0010 A. halleri v1.1
Defline:  (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  10
Name:  ? Araha.3842s0010 Secondary Identifier:  ? PAC:28848698
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3842s0010 0.5kb upstream 0.5kb upstream 2888 true Scaffold3842: 33346-36233 Arabidopsis halleri
Araha.3842s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3842: 35734-36233 Arabidopsis halleri
Araha.3842s0010 0.5kb downstream 0.5kb downstream 2888 true Scaffold3842: 32846-35733 Arabidopsis halleri
Araha.3842s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3842: 32846-33345 Arabidopsis halleri
Araha.3842s0010 1.0kb upstream 1.0kb upstream 3388 true Scaffold3842: 33346-36733 Arabidopsis halleri
Araha.3842s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3842: 35734-36733 Arabidopsis halleri
Araha.3842s0010 1.0kb downstream 1.0kb downstream 3388 true Scaffold3842: 32346-35733 Arabidopsis halleri
Araha.3842s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3842: 32346-33345 Arabidopsis halleri
Araha.3842s0010 2.0kb upstream 2.0kb upstream 4004 true Scaffold3842: 33346-37349 Arabidopsis halleri
Araha.3842s0010 2.0kb upstream 2.0kb upstream 1616 false Scaffold3842: 35734-37349 Arabidopsis halleri
Araha.3842s0010 2.0kb downstream 2.0kb downstream 4388 true Scaffold3842: 31346-35733 Arabidopsis halleri
Araha.3842s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3842: 31346-33345 Arabidopsis halleri
Araha.3842s0010 5.0kb upstream 5.0kb upstream 4004 true Scaffold3842: 33346-37349 Arabidopsis halleri
Araha.3842s0010 5.0kb upstream 5.0kb upstream 1616 false Scaffold3842: 35734-37349 Arabidopsis halleri
Araha.3842s0010 5.0kb downstream 5.0kb downstream 7388 true Scaffold3842: 28346-35733 Arabidopsis halleri
Araha.3842s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3842: 28346-33345 Arabidopsis halleri
Araha.3842s0010 10.0kb upstream 10.0kb upstream 4004 true Scaffold3842: 33346-37349 Arabidopsis halleri
Araha.3842s0010 10.0kb upstream 10.0kb upstream 1616 false Scaffold3842: 35734-37349 Arabidopsis halleri
Araha.3842s0010 10.0kb downstream 10.0kb downstream 12388 true Scaffold3842: 23346-35733 Arabidopsis halleri
Araha.3842s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3842: 23346-33345 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372618 5261 Brassicaceae View MSA
123839847 5264 Brassicales-Malvales View MSA
124341386 5266 SBM View MSA
124247778 5268 Malvidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain