Protein Family : TATA binding protein 1 124247778

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  32

32 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29822.t000078 (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) R. communis v0.1 573   29822: 414908-415480
29950.t000038 (1 of 1) PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3121   29950: 217085-220205
orange1.1g029591m.g (1 of 1) PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN C. sinensis v1.1 2657   scaffold00117: 346240-348896
AT3G13445 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) A. thaliana TAIR10 TBP1 2432   Chr3: 4379793-4382224
AT1G55520 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) A. thaliana TAIR10 TBP2 2366   Chr1: 20725726-20728091
Thhalv10021552m.g (1 of 3) PTHR10126 - TATA-BOX BINDING PROTEIN E. salsugineum v1.0 2293   scaffold_13: 5013033-5015325
Thhalv10011790m.g (1 of 3) PTHR10126 - TATA-BOX BINDING PROTEIN E. salsugineum v1.0 2840   scaffold_7: 374268-377107
Ciclev10022324m.g (1 of 1) PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN C. clementina v1.0 4560   scaffold_3: 41295747-41300306
Lus10002634.g (1 of 3) KOG3302 - TATA-box binding protein (TBP), component of TFIID and TFIIIB L. usitatissimum v1.0 1470   scaffold2083: 97736-99205
Lus10020260.g (1 of 3) KOG3302 - TATA-box binding protein (TBP), component of TFIID and TFIIIB L. usitatissimum v1.0 1451   scaffold641: 116688-118138
Gorai.004G244700 (1 of 3) PTHR10126 - TATA-BOX BINDING PROTEIN G. raimondii v2.1 3591   Chr04: 58192963-58196553
Thecc1EG001402 (1 of 5) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) T. cacao v1.1 877   scaffold_1: 6929757-6930633
Araha.3842s0010 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN A. halleri v1.1 2388   Scaffold3842: 33346-35733
Araha.7575s0007 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN A. halleri v1.1 2464   Scaffold7575: 29348-31811
Cagra.0001s0028 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN C. grandiflora v1.1 2480   Scaffold1: 117616-120095
Cagra.0690s0017 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN C. grandiflora v1.1 2466   Scaffold690: 84099-86564
Brara.B00215 (1 of 7) PTHR10126 - TATA-BOX BINDING PROTEIN B. rapa FPsc v1.3 615   A02: 1052151-1052765
Brara.E01460 (1 of 7) PTHR10126 - TATA-BOX BINDING PROTEIN B. rapa FPsc v1.3 2511   A05: 9392230-9394740
Brara.E02772 (1 of 7) PTHR10126 - TATA-BOX BINDING PROTEIN B. rapa FPsc v1.3 2349   A05: 23991696-23994044
Bostr.3640s0136 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN B. stricta v1.2 2627   Scaffold3640: 612187-614813
Bostr.6758s0027 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN B. stricta v1.2 2414   Scaffold6758: 130492-132905
SapurV1A.0680s0010 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) S. purpurea v1.0 4565   chr13: 6084174-6088738
SapurV1A.0308s0180 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) S. purpurea v1.0 5094   chr19: 2226288-2231381
Manes.08G149100 (1 of 2) PTHR10126 - TATA-BOX BINDING PROTEIN M. esculenta v6.1 3884   Chromosome08: 31408989-31412872
AL1G63540 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) A. lyrata v2.1 2439   scaffold_1: 29332906-29335344
AL3G25350 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) A. lyrata v2.1 2382   scaffold_3: 5463479-5465860
Potri.013G059300 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. trichocarpa v3.1 5115   Chr13: 4437095-4442209
Potri.019G033300 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. trichocarpa v3.1 5386   Chr19: 3806993-3812378
Podel.13G062900 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. deltoides WV94 v2.1 4973   Chr13: 4610010-4614982
Podel.19G031400 (1 of 2) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) P. deltoides WV94 v2.1 5453   Chr19: 3353223-3358675

32 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29822.m003403 R. communis v0.1 124247778 TATA binding protein 1 2 5268 Malvidae
29950.m001154 R. communis v0.1 124247778 TATA binding protein 1 2 5268 Malvidae
orange1.1g029591m C. sinensis v1.1 124247778 TATA binding protein 1 1 5268 Malvidae
AT1G55520.1 A. thaliana TAIR10 124247778 TATA binding protein 1 2 5268 Malvidae
Thhalv10011790m E. salsugineum v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
Lus10002634 L. usitatissimum v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
Cagra.0690s0017.1.p C. grandiflora v1.1 124247778 TATA binding protein 1 2 5268 Malvidae
SapurV1A.0680s0010.1.p S. purpurea v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
Manes.08G149100.1.p M. esculenta v6.1 124247778 TATA binding protein 1 1 5268 Malvidae
Potri.019G033300.1.p P. trichocarpa v3.1 124247778 TATA binding protein 1 2 5268 Malvidae
Podel.19G031400.1.p P. deltoides WV94 v2.1 124247778 TATA binding protein 1 2 5268 Malvidae
AT3G13445.1 A. thaliana TAIR10 124247778 TATA binding protein 1 2 5268 Malvidae
Thhalv10021552m E. salsugineum v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
Ciclev10022324m C. clementina v1.0 124247778 TATA binding protein 1 1 5268 Malvidae
Lus10020260 L. usitatissimum v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
Gorai.004G244700.1 G. raimondii v2.1 124247778 TATA binding protein 1 1 5268 Malvidae
Thecc1EG001402t1 T. cacao v1.1 124247778 TATA binding protein 1 1 5268 Malvidae
Araha.7575s0007.1.p A. halleri v1.1 124247778 TATA binding protein 1 2 5268 Malvidae
Araha.3842s0010.1.p A. halleri v1.1 124247778 TATA binding protein 1 2 5268 Malvidae
Cagra.0001s0028.1.p C. grandiflora v1.1 124247778 TATA binding protein 1 2 5268 Malvidae
Brara.E01460.1.p B. rapa FPsc v1.3 124247778 TATA binding protein 1 3 5268 Malvidae
Brara.B00215.1.p B. rapa FPsc v1.3 124247778 TATA binding protein 1 3 5268 Malvidae
Brara.E02772.1.p B. rapa FPsc v1.3 124247778 TATA binding protein 1 3 5268 Malvidae
Bostr.6758s0027.1.p B. stricta v1.2 124247778 TATA binding protein 1 2 5268 Malvidae
Bostr.3640s0136.1.p B. stricta v1.2 124247778 TATA binding protein 1 2 5268 Malvidae
SapurV1A.0308s0180.1.p S. purpurea v1.0 124247778 TATA binding protein 1 2 5268 Malvidae
AL3G25350.t1 A. lyrata v2.1 124247778 TATA binding protein 1 2 5268 Malvidae
AL1G63540.t1 A. lyrata v2.1 124247778 TATA binding protein 1 2 5268 Malvidae
Potri.013G059300.1.p P. trichocarpa v3.1 124247778 TATA binding protein 1 2 5268 Malvidae
Podel.13G062900.1.p P. deltoides WV94 v2.1 124247778 TATA binding protein 1 2 5268 Malvidae