Gene : orange1.1g029591m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN Genomic Order:  47
Name:  ? orange1.1g029591m.g Secondary Identifier:  ? PAC:18116235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g029591m.g 0.5kb upstream 0.5kb upstream 3157 true scaffold00117: 345740-348896 Citrus sinensis
orange1.1g029591m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00117: 345740-346239 Citrus sinensis
orange1.1g029591m.g 0.5kb downstream 0.5kb downstream 3157 true scaffold00117: 346240-349396 Citrus sinensis
orange1.1g029591m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00117: 348897-349396 Citrus sinensis
orange1.1g029591m.g 1.0kb upstream 1.0kb upstream 3657 true scaffold00117: 345240-348896 Citrus sinensis
orange1.1g029591m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00117: 345240-346239 Citrus sinensis
orange1.1g029591m.g 1.0kb downstream 1.0kb downstream 3657 true scaffold00117: 346240-349896 Citrus sinensis
orange1.1g029591m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00117: 348897-349896 Citrus sinensis
orange1.1g029591m.g 2.0kb upstream 2.0kb upstream 4657 true scaffold00117: 344240-348896 Citrus sinensis
orange1.1g029591m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00117: 344240-346239 Citrus sinensis
orange1.1g029591m.g 2.0kb downstream 2.0kb downstream 4657 true scaffold00117: 346240-350896 Citrus sinensis
orange1.1g029591m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00117: 348897-350896 Citrus sinensis
orange1.1g029591m.g 5.0kb upstream 5.0kb upstream 7657 true scaffold00117: 341240-348896 Citrus sinensis
orange1.1g029591m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00117: 341240-346239 Citrus sinensis
orange1.1g029591m.g 5.0kb downstream 5.0kb downstream 7657 true scaffold00117: 346240-353896 Citrus sinensis
orange1.1g029591m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00117: 348897-353896 Citrus sinensis
orange1.1g029591m.g 10.0kb upstream 10.0kb upstream 12657 true scaffold00117: 336240-348896 Citrus sinensis
orange1.1g029591m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00117: 336240-346239 Citrus sinensis
orange1.1g029591m.g 10.0kb downstream 10.0kb downstream 12657 true scaffold00117: 346240-358896 Citrus sinensis
orange1.1g029591m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00117: 348897-358896 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341386 5266 SBM View MSA
124247778 5268 Malvidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain