Gene : Araha.3974s0014 A. halleri v1.1

Defline:  (1 of 4) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  14
Name:  ? Araha.3974s0014 Secondary Identifier:  ? PAC:28841799

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3974s0014 0.5kb upstream 0.5kb upstream 3929 true Scaffold3974: 47128-51056 Arabidopsis halleri
Araha.3974s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold3974: 47128-47627 Arabidopsis halleri
Araha.3974s0014 0.5kb downstream 0.5kb downstream 3929 true Scaffold3974: 47628-51556 Arabidopsis halleri
Araha.3974s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold3974: 51057-51556 Arabidopsis halleri
Araha.3974s0014 1.0kb upstream 1.0kb upstream 4429 true Scaffold3974: 46628-51056 Arabidopsis halleri
Araha.3974s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold3974: 46628-47627 Arabidopsis halleri
Araha.3974s0014 1.0kb downstream 1.0kb downstream 4429 true Scaffold3974: 47628-52056 Arabidopsis halleri
Araha.3974s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold3974: 51057-52056 Arabidopsis halleri
Araha.3974s0014 2.0kb upstream 2.0kb upstream 5429 true Scaffold3974: 45628-51056 Arabidopsis halleri
Araha.3974s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold3974: 45628-47627 Arabidopsis halleri
Araha.3974s0014 2.0kb downstream 2.0kb downstream 5429 true Scaffold3974: 47628-53056 Arabidopsis halleri
Araha.3974s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold3974: 51057-53056 Arabidopsis halleri
Araha.3974s0014 5.0kb upstream 5.0kb upstream 8429 true Scaffold3974: 42628-51056 Arabidopsis halleri
Araha.3974s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold3974: 42628-47627 Arabidopsis halleri
Araha.3974s0014 5.0kb downstream 5.0kb downstream 8429 true Scaffold3974: 47628-56056 Arabidopsis halleri
Araha.3974s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold3974: 51057-56056 Arabidopsis halleri
Araha.3974s0014 10.0kb upstream 10.0kb upstream 13429 true Scaffold3974: 37628-51056 Arabidopsis halleri
Araha.3974s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold3974: 37628-47627 Arabidopsis halleri
Araha.3974s0014 10.0kb downstream 10.0kb downstream 13429 true Scaffold3974: 47628-61056 Arabidopsis halleri
Araha.3974s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold3974: 51057-61056 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122367368 5261 Brassicaceae View MSA
123837057 5264 Brassicales-Malvales View MSA
124345646 5266 SBM View MSA
124238860 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain