Gene : Araha.4408s0006 A. halleri v1.1

Defline:  (1 of 8) KOG3140 - Predicted membrane protein Genomic Order:  6
Name:  ? Araha.4408s0006 Secondary Identifier:  ? PAC:28844380

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4408s0006 0.5kb upstream 0.5kb upstream 2860 true Scaffold4408: 30431-33290 Arabidopsis halleri
Araha.4408s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4408: 30431-30930 Arabidopsis halleri
Araha.4408s0006 0.5kb downstream 0.5kb downstream 2860 true Scaffold4408: 30931-33790 Arabidopsis halleri
Araha.4408s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4408: 33291-33790 Arabidopsis halleri
Araha.4408s0006 1.0kb upstream 1.0kb upstream 3360 true Scaffold4408: 29931-33290 Arabidopsis halleri
Araha.4408s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4408: 29931-30930 Arabidopsis halleri
Araha.4408s0006 1.0kb downstream 1.0kb downstream 3360 true Scaffold4408: 30931-34290 Arabidopsis halleri
Araha.4408s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4408: 33291-34290 Arabidopsis halleri
Araha.4408s0006 2.0kb upstream 2.0kb upstream 4360 true Scaffold4408: 28931-33290 Arabidopsis halleri
Araha.4408s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4408: 28931-30930 Arabidopsis halleri
Araha.4408s0006 2.0kb downstream 2.0kb downstream 4360 true Scaffold4408: 30931-35290 Arabidopsis halleri
Araha.4408s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4408: 33291-35290 Arabidopsis halleri
Araha.4408s0006 5.0kb upstream 5.0kb upstream 7360 true Scaffold4408: 25931-33290 Arabidopsis halleri
Araha.4408s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4408: 25931-30930 Arabidopsis halleri
Araha.4408s0006 5.0kb downstream 5.0kb downstream 7360 true Scaffold4408: 30931-38290 Arabidopsis halleri
Araha.4408s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold4408: 33291-38290 Arabidopsis halleri
Araha.4408s0006 10.0kb upstream 10.0kb upstream 12360 true Scaffold4408: 20931-33290 Arabidopsis halleri
Araha.4408s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4408: 20931-30930 Arabidopsis halleri
Araha.4408s0006 10.0kb downstream 10.0kb downstream 12360 true Scaffold4408: 30931-43290 Arabidopsis halleri
Araha.4408s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold4408: 33291-43290 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373190 5261 Brassicaceae View MSA
123832301 5264 Brassicales-Malvales View MSA
124341060 5266 SBM View MSA
124250793 5268 Malvidae View MSA
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain