Gene : Araha.4757s0004 A. halleri v1.1
Defline:  (1 of 6) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  4
Name:  ? Araha.4757s0004 Secondary Identifier:  ? PAC:28853527
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-2541 Arabidopsis halleri pathologic  
Ahalleri PWY-5670 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4757s0004 0.5kb upstream 0.5kb upstream 2380 true Scaffold4757: 15999-18378 Arabidopsis halleri
Araha.4757s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4757: 15999-16498 Arabidopsis halleri
Araha.4757s0004 0.5kb downstream 0.5kb downstream 2380 true Scaffold4757: 16499-18878 Arabidopsis halleri
Araha.4757s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4757: 18379-18878 Arabidopsis halleri
Araha.4757s0004 1.0kb upstream 1.0kb upstream 2880 true Scaffold4757: 15499-18378 Arabidopsis halleri
Araha.4757s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4757: 15499-16498 Arabidopsis halleri
Araha.4757s0004 1.0kb downstream 1.0kb downstream 2880 true Scaffold4757: 16499-19378 Arabidopsis halleri
Araha.4757s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4757: 18379-19378 Arabidopsis halleri
Araha.4757s0004 2.0kb upstream 2.0kb upstream 3880 true Scaffold4757: 14499-18378 Arabidopsis halleri
Araha.4757s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4757: 14499-16498 Arabidopsis halleri
Araha.4757s0004 2.0kb downstream 2.0kb downstream 3880 true Scaffold4757: 16499-20378 Arabidopsis halleri
Araha.4757s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4757: 18379-20378 Arabidopsis halleri
Araha.4757s0004 5.0kb upstream 5.0kb upstream 6880 true Scaffold4757: 11499-18378 Arabidopsis halleri
Araha.4757s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4757: 11499-16498 Arabidopsis halleri
Araha.4757s0004 5.0kb downstream 5.0kb downstream 6880 true Scaffold4757: 16499-23378 Arabidopsis halleri
Araha.4757s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4757: 18379-23378 Arabidopsis halleri
Araha.4757s0004 10.0kb upstream 10.0kb upstream 11880 true Scaffold4757: 6499-18378 Arabidopsis halleri
Araha.4757s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4757: 6499-16498 Arabidopsis halleri
Araha.4757s0004 10.0kb downstream 10.0kb downstream 11314 true Scaffold4757: 16499-27812 Arabidopsis halleri
Araha.4757s0004 10.0kb downstream 10.0kb downstream 9434 false Scaffold4757: 18379-27812 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380334 5261 Brassicaceae View MSA
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain