Gene : Araha.4629s0026 A. halleri v1.1

Defline:  (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  26
Name:  ? Araha.4629s0026 Secondary Identifier:  ? PAC:28859927

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4629s0026 0.5kb upstream 0.5kb upstream 2234 true Scaffold4629: 82835-85068 Arabidopsis halleri
Araha.4629s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold4629: 84569-85068 Arabidopsis halleri
Araha.4629s0026 0.5kb downstream 0.5kb downstream 2234 true Scaffold4629: 82335-84568 Arabidopsis halleri
Araha.4629s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold4629: 82335-82834 Arabidopsis halleri
Araha.4629s0026 1.0kb upstream 1.0kb upstream 2734 true Scaffold4629: 82835-85568 Arabidopsis halleri
Araha.4629s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold4629: 84569-85568 Arabidopsis halleri
Araha.4629s0026 1.0kb downstream 1.0kb downstream 2734 true Scaffold4629: 81835-84568 Arabidopsis halleri
Araha.4629s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold4629: 81835-82834 Arabidopsis halleri
Araha.4629s0026 2.0kb upstream 2.0kb upstream 3734 true Scaffold4629: 82835-86568 Arabidopsis halleri
Araha.4629s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold4629: 84569-86568 Arabidopsis halleri
Araha.4629s0026 2.0kb downstream 2.0kb downstream 3734 true Scaffold4629: 80835-84568 Arabidopsis halleri
Araha.4629s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold4629: 80835-82834 Arabidopsis halleri
Araha.4629s0026 5.0kb upstream 5.0kb upstream 6734 true Scaffold4629: 82835-89568 Arabidopsis halleri
Araha.4629s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold4629: 84569-89568 Arabidopsis halleri
Araha.4629s0026 5.0kb downstream 5.0kb downstream 6734 true Scaffold4629: 77835-84568 Arabidopsis halleri
Araha.4629s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold4629: 77835-82834 Arabidopsis halleri
Araha.4629s0026 10.0kb upstream 10.0kb upstream 8978 true Scaffold4629: 82835-91812 Arabidopsis halleri
Araha.4629s0026 10.0kb upstream 10.0kb upstream 7244 false Scaffold4629: 84569-91812 Arabidopsis halleri
Araha.4629s0026 10.0kb downstream 10.0kb downstream 11734 true Scaffold4629: 72835-84568 Arabidopsis halleri
Araha.4629s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold4629: 72835-82834 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368808 5261 Brassicaceae View MSA
123840230 5264 Brassicales-Malvales View MSA
124343591 5266 SBM View MSA
124242497 5268 Malvidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain