Gene : Araha.4543s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B Genomic Order:  5
Name:  ? Araha.4543s0005 Secondary Identifier:  ? PAC:28852234

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4543s0005 0.5kb upstream 0.5kb upstream 2218 true Scaffold4543: 13735-15952 Arabidopsis halleri
Araha.4543s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4543: 13735-14234 Arabidopsis halleri
Araha.4543s0005 0.5kb downstream 0.5kb downstream 2218 true Scaffold4543: 14235-16452 Arabidopsis halleri
Araha.4543s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4543: 15953-16452 Arabidopsis halleri
Araha.4543s0005 1.0kb upstream 1.0kb upstream 2718 true Scaffold4543: 13235-15952 Arabidopsis halleri
Araha.4543s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4543: 13235-14234 Arabidopsis halleri
Araha.4543s0005 1.0kb downstream 1.0kb downstream 2718 true Scaffold4543: 14235-16952 Arabidopsis halleri
Araha.4543s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4543: 15953-16952 Arabidopsis halleri
Araha.4543s0005 2.0kb upstream 2.0kb upstream 3718 true Scaffold4543: 12235-15952 Arabidopsis halleri
Araha.4543s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4543: 12235-14234 Arabidopsis halleri
Araha.4543s0005 2.0kb downstream 2.0kb downstream 3718 true Scaffold4543: 14235-17952 Arabidopsis halleri
Araha.4543s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4543: 15953-17952 Arabidopsis halleri
Araha.4543s0005 5.0kb upstream 5.0kb upstream 6718 true Scaffold4543: 9235-15952 Arabidopsis halleri
Araha.4543s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4543: 9235-14234 Arabidopsis halleri
Araha.4543s0005 5.0kb downstream 5.0kb downstream 6718 true Scaffold4543: 14235-20952 Arabidopsis halleri
Araha.4543s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4543: 15953-20952 Arabidopsis halleri
Araha.4543s0005 10.0kb upstream 10.0kb upstream 11718 true Scaffold4543: 4235-15952 Arabidopsis halleri
Araha.4543s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4543: 4235-14234 Arabidopsis halleri
Araha.4543s0005 10.0kb downstream 10.0kb downstream 11651 true Scaffold4543: 14235-25885 Arabidopsis halleri
Araha.4543s0005 10.0kb downstream 10.0kb downstream 9933 false Scaffold4543: 15953-25885 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366770 5261 Brassicaceae View MSA
123827519 5264 Brassicales-Malvales View MSA
124342737 5266 SBM View MSA
124252177 5268 Malvidae View MSA
124062666 5270 Rosid View MSA
123738342 5271 Pentapetalae View MSA
122787520 5272 Eudicot View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain