Gene : Araha.5006s0001 A. halleri v1.1
Defline:  (1 of 1) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  1
Name:  ? Araha.5006s0001 Secondary Identifier:  ? PAC:28837356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5063 Arabidopsis halleri pathologic  
Ahalleri PWY-5064 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5006s0001 0.5kb upstream 0.5kb upstream 2268 true Scaffold5006: 400-2667 Arabidopsis halleri
Araha.5006s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5006: 400-899 Arabidopsis halleri
Araha.5006s0001 0.5kb downstream 0.5kb downstream 2268 true Scaffold5006: 900-3167 Arabidopsis halleri
Araha.5006s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5006: 2668-3167 Arabidopsis halleri
Araha.5006s0001 1.0kb upstream 1.0kb upstream 2667 true Scaffold5006: 1-2667 Arabidopsis halleri
Araha.5006s0001 1.0kb upstream 1.0kb upstream 899 false Scaffold5006: 1-899 Arabidopsis halleri
Araha.5006s0001 1.0kb downstream 1.0kb downstream 2768 true Scaffold5006: 900-3667 Arabidopsis halleri
Araha.5006s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5006: 2668-3667 Arabidopsis halleri
Araha.5006s0001 2.0kb upstream 2.0kb upstream 2667 true Scaffold5006: 1-2667 Arabidopsis halleri
Araha.5006s0001 2.0kb upstream 2.0kb upstream 899 false Scaffold5006: 1-899 Arabidopsis halleri
Araha.5006s0001 2.0kb downstream 2.0kb downstream 3768 true Scaffold5006: 900-4667 Arabidopsis halleri
Araha.5006s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5006: 2668-4667 Arabidopsis halleri
Araha.5006s0001 5.0kb upstream 5.0kb upstream 2667 true Scaffold5006: 1-2667 Arabidopsis halleri
Araha.5006s0001 5.0kb upstream 5.0kb upstream 899 false Scaffold5006: 1-899 Arabidopsis halleri
Araha.5006s0001 5.0kb downstream 5.0kb downstream 6768 true Scaffold5006: 900-7667 Arabidopsis halleri
Araha.5006s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5006: 2668-7667 Arabidopsis halleri
Araha.5006s0001 10.0kb upstream 10.0kb upstream 2667 true Scaffold5006: 1-2667 Arabidopsis halleri
Araha.5006s0001 10.0kb upstream 10.0kb upstream 899 false Scaffold5006: 1-899 Arabidopsis halleri
Araha.5006s0001 10.0kb downstream 10.0kb downstream 11768 true Scaffold5006: 900-12667 Arabidopsis halleri
Araha.5006s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5006: 2668-12667 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368864 5261 Brassicaceae View MSA
123831426 5264 Brassicales-Malvales View MSA
124345987 5266 SBM View MSA
124242880 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain