Gene : Araha.5007s0005 A. halleri v1.1
Defline:  (1 of 2) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Genomic Order:  5
Name:  ? Araha.5007s0005 Secondary Identifier:  ? PAC:28843375
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5007s0005 0.5kb upstream 0.5kb upstream 4696 true Scaffold5007: 29917-34612 Arabidopsis halleri
Araha.5007s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5007: 29917-30416 Arabidopsis halleri
Araha.5007s0005 0.5kb downstream 0.5kb downstream 4696 true Scaffold5007: 30417-35112 Arabidopsis halleri
Araha.5007s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5007: 34613-35112 Arabidopsis halleri
Araha.5007s0005 1.0kb upstream 1.0kb upstream 5196 true Scaffold5007: 29417-34612 Arabidopsis halleri
Araha.5007s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5007: 29417-30416 Arabidopsis halleri
Araha.5007s0005 1.0kb downstream 1.0kb downstream 5196 true Scaffold5007: 30417-35612 Arabidopsis halleri
Araha.5007s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5007: 34613-35612 Arabidopsis halleri
Araha.5007s0005 2.0kb upstream 2.0kb upstream 6196 true Scaffold5007: 28417-34612 Arabidopsis halleri
Araha.5007s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5007: 28417-30416 Arabidopsis halleri
Araha.5007s0005 2.0kb downstream 2.0kb downstream 6196 true Scaffold5007: 30417-36612 Arabidopsis halleri
Araha.5007s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5007: 34613-36612 Arabidopsis halleri
Araha.5007s0005 5.0kb upstream 5.0kb upstream 9196 true Scaffold5007: 25417-34612 Arabidopsis halleri
Araha.5007s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5007: 25417-30416 Arabidopsis halleri
Araha.5007s0005 5.0kb downstream 5.0kb downstream 9196 true Scaffold5007: 30417-39612 Arabidopsis halleri
Araha.5007s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5007: 34613-39612 Arabidopsis halleri
Araha.5007s0005 10.0kb upstream 10.0kb upstream 14196 true Scaffold5007: 20417-34612 Arabidopsis halleri
Araha.5007s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5007: 20417-30416 Arabidopsis halleri
Araha.5007s0005 10.0kb downstream 10.0kb downstream 12787 true Scaffold5007: 30417-43203 Arabidopsis halleri
Araha.5007s0005 10.0kb downstream 10.0kb downstream 8591 false Scaffold5007: 34613-43203 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370910 5261 Brassicaceae View MSA
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain