Gene : Araha.5131s0003 A. halleri v1.1

Defline:  (1 of 18) PF05641 - Agenet domain (Agenet) Genomic Order:  3
Name:  ? Araha.5131s0003 Secondary Identifier:  ? PAC:28857849

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5131s0003 0.5kb upstream 0.5kb upstream 3963 true Scaffold5131: 17876-21838 Arabidopsis halleri
Araha.5131s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5131: 21339-21838 Arabidopsis halleri
Araha.5131s0003 0.5kb downstream 0.5kb downstream 3963 true Scaffold5131: 17376-21338 Arabidopsis halleri
Araha.5131s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5131: 17376-17875 Arabidopsis halleri
Araha.5131s0003 1.0kb upstream 1.0kb upstream 4463 true Scaffold5131: 17876-22338 Arabidopsis halleri
Araha.5131s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5131: 21339-22338 Arabidopsis halleri
Araha.5131s0003 1.0kb downstream 1.0kb downstream 4463 true Scaffold5131: 16876-21338 Arabidopsis halleri
Araha.5131s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5131: 16876-17875 Arabidopsis halleri
Araha.5131s0003 2.0kb upstream 2.0kb upstream 5463 true Scaffold5131: 17876-23338 Arabidopsis halleri
Araha.5131s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5131: 21339-23338 Arabidopsis halleri
Araha.5131s0003 2.0kb downstream 2.0kb downstream 5463 true Scaffold5131: 15876-21338 Arabidopsis halleri
Araha.5131s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5131: 15876-17875 Arabidopsis halleri
Araha.5131s0003 5.0kb upstream 5.0kb upstream 8463 true Scaffold5131: 17876-26338 Arabidopsis halleri
Araha.5131s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5131: 21339-26338 Arabidopsis halleri
Araha.5131s0003 5.0kb downstream 5.0kb downstream 8463 true Scaffold5131: 12876-21338 Arabidopsis halleri
Araha.5131s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5131: 12876-17875 Arabidopsis halleri
Araha.5131s0003 10.0kb upstream 10.0kb upstream 13463 true Scaffold5131: 17876-31338 Arabidopsis halleri
Araha.5131s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5131: 21339-31338 Arabidopsis halleri
Araha.5131s0003 10.0kb downstream 10.0kb downstream 13463 true Scaffold5131: 7876-21338 Arabidopsis halleri
Araha.5131s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5131: 7876-17875 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381733 5261 Brassicaceae View MSA
123837801 5264 Brassicales-Malvales View MSA
124322359 5266 SBM View MSA
124244035 5268 Malvidae View MSA
124050504 5270 Rosid View MSA
123744023 5271 Pentapetalae View MSA
122793938 5272 Eudicot View MSA
122048804 5273 Angiosperm View MSA
121311119 5274 Embryophyte View MSA
123348460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain