Gene : Araha.5102s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR23012//PTHR23012:SF100 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  4
Name:  ? Araha.5102s0004 Secondary Identifier:  ? PAC:28846109
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5102s0004 0.5kb upstream 0.5kb upstream 2215 true Scaffold5102: 16853-19067 Arabidopsis halleri
Araha.5102s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5102: 16853-17352 Arabidopsis halleri
Araha.5102s0004 0.5kb downstream 0.5kb downstream 2215 true Scaffold5102: 17353-19567 Arabidopsis halleri
Araha.5102s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5102: 19068-19567 Arabidopsis halleri
Araha.5102s0004 1.0kb upstream 1.0kb upstream 2715 true Scaffold5102: 16353-19067 Arabidopsis halleri
Araha.5102s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5102: 16353-17352 Arabidopsis halleri
Araha.5102s0004 1.0kb downstream 1.0kb downstream 2715 true Scaffold5102: 17353-20067 Arabidopsis halleri
Araha.5102s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5102: 19068-20067 Arabidopsis halleri
Araha.5102s0004 2.0kb upstream 2.0kb upstream 3715 true Scaffold5102: 15353-19067 Arabidopsis halleri
Araha.5102s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5102: 15353-17352 Arabidopsis halleri
Araha.5102s0004 2.0kb downstream 2.0kb downstream 3715 true Scaffold5102: 17353-21067 Arabidopsis halleri
Araha.5102s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5102: 19068-21067 Arabidopsis halleri
Araha.5102s0004 5.0kb upstream 5.0kb upstream 6715 true Scaffold5102: 12353-19067 Arabidopsis halleri
Araha.5102s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5102: 12353-17352 Arabidopsis halleri
Araha.5102s0004 5.0kb downstream 5.0kb downstream 6715 true Scaffold5102: 17353-24067 Arabidopsis halleri
Araha.5102s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5102: 19068-24067 Arabidopsis halleri
Araha.5102s0004 10.0kb upstream 10.0kb upstream 11715 true Scaffold5102: 7353-19067 Arabidopsis halleri
Araha.5102s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5102: 7353-17352 Arabidopsis halleri
Araha.5102s0004 10.0kb downstream 10.0kb downstream 11715 true Scaffold5102: 17353-29067 Arabidopsis halleri
Araha.5102s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5102: 19068-29067 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
122368143 5261 Brassicaceae View MSA
123835884 5264 Brassicales-Malvales View MSA
124347757 5266 SBM View MSA
124250999 5268 Malvidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain