Gene : Araha.5052s0030 A. halleri v1.1
Defline:  (1 of 2) PTHR16019 - SYNAPSE-ASSOCIATED PROTEIN Genomic Order:  30
Name:  ? Araha.5052s0030 Secondary Identifier:  ? PAC:28854090
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5052s0030 0.5kb upstream 0.5kb upstream 1880 true Scaffold5052: 108140-110019 Arabidopsis halleri
Araha.5052s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold5052: 109520-110019 Arabidopsis halleri
Araha.5052s0030 0.5kb downstream 0.5kb downstream 1880 true Scaffold5052: 107640-109519 Arabidopsis halleri
Araha.5052s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold5052: 107640-108139 Arabidopsis halleri
Araha.5052s0030 1.0kb upstream 1.0kb upstream 2380 true Scaffold5052: 108140-110519 Arabidopsis halleri
Araha.5052s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold5052: 109520-110519 Arabidopsis halleri
Araha.5052s0030 1.0kb downstream 1.0kb downstream 2380 true Scaffold5052: 107140-109519 Arabidopsis halleri
Araha.5052s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold5052: 107140-108139 Arabidopsis halleri
Araha.5052s0030 2.0kb upstream 2.0kb upstream 3380 true Scaffold5052: 108140-111519 Arabidopsis halleri
Araha.5052s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold5052: 109520-111519 Arabidopsis halleri
Araha.5052s0030 2.0kb downstream 2.0kb downstream 3380 true Scaffold5052: 106140-109519 Arabidopsis halleri
Araha.5052s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold5052: 106140-108139 Arabidopsis halleri
Araha.5052s0030 5.0kb upstream 5.0kb upstream 6380 true Scaffold5052: 108140-114519 Arabidopsis halleri
Araha.5052s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold5052: 109520-114519 Arabidopsis halleri
Araha.5052s0030 5.0kb downstream 5.0kb downstream 6380 true Scaffold5052: 103140-109519 Arabidopsis halleri
Araha.5052s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold5052: 103140-108139 Arabidopsis halleri
Araha.5052s0030 10.0kb upstream 10.0kb upstream 11380 true Scaffold5052: 108140-119519 Arabidopsis halleri
Araha.5052s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold5052: 109520-119519 Arabidopsis halleri
Araha.5052s0030 10.0kb downstream 10.0kb downstream 11380 true Scaffold5052: 98140-109519 Arabidopsis halleri
Araha.5052s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold5052: 98140-108139 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363627 5261 Brassicaceae View MSA
123833281 5264 Brassicales-Malvales View MSA
124340089 5266 SBM View MSA
124250927 5268 Malvidae View MSA
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain