Gene : Araha.5054s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR22780:SF13 - AP-4 COMPLEX SUBUNIT EPSILON-1 Genomic Order:  2
Name:  ? Araha.5054s0002 Secondary Identifier:  ? PAC:28861650

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5054s0002 0.5kb upstream 0.5kb upstream 4620 true Scaffold5054: 8870-13489 Arabidopsis halleri
Araha.5054s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5054: 12990-13489 Arabidopsis halleri
Araha.5054s0002 0.5kb downstream 0.5kb downstream 4620 true Scaffold5054: 8370-12989 Arabidopsis halleri
Araha.5054s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5054: 8370-8869 Arabidopsis halleri
Araha.5054s0002 1.0kb upstream 1.0kb upstream 5120 true Scaffold5054: 8870-13989 Arabidopsis halleri
Araha.5054s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5054: 12990-13989 Arabidopsis halleri
Araha.5054s0002 1.0kb downstream 1.0kb downstream 5120 true Scaffold5054: 7870-12989 Arabidopsis halleri
Araha.5054s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5054: 7870-8869 Arabidopsis halleri
Araha.5054s0002 2.0kb upstream 2.0kb upstream 6120 true Scaffold5054: 8870-14989 Arabidopsis halleri
Araha.5054s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5054: 12990-14989 Arabidopsis halleri
Araha.5054s0002 2.0kb downstream 2.0kb downstream 6120 true Scaffold5054: 6870-12989 Arabidopsis halleri
Araha.5054s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5054: 6870-8869 Arabidopsis halleri
Araha.5054s0002 5.0kb upstream 5.0kb upstream 7915 true Scaffold5054: 8870-16784 Arabidopsis halleri
Araha.5054s0002 5.0kb upstream 5.0kb upstream 3795 false Scaffold5054: 12990-16784 Arabidopsis halleri
Araha.5054s0002 5.0kb downstream 5.0kb downstream 9120 true Scaffold5054: 3870-12989 Arabidopsis halleri
Araha.5054s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5054: 3870-8869 Arabidopsis halleri
Araha.5054s0002 10.0kb upstream 10.0kb upstream 7915 true Scaffold5054: 8870-16784 Arabidopsis halleri
Araha.5054s0002 10.0kb upstream 10.0kb upstream 3795 false Scaffold5054: 12990-16784 Arabidopsis halleri
Araha.5054s0002 10.0kb downstream 10.0kb downstream 12989 true Scaffold5054: 1-12989 Arabidopsis halleri
Araha.5054s0002 10.0kb downstream 10.0kb downstream 8869 false Scaffold5054: 1-8869 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376158 5261 Brassicaceae View MSA
123830957 5264 Brassicales-Malvales View MSA
124339376 5266 SBM View MSA
124237282 5268 Malvidae View MSA
124067026 5270 Rosid View MSA
123751016 5271 Pentapetalae View MSA
122788074 5272 Eudicot View MSA
122045484 5273 Angiosperm View MSA
121344174 5274 Embryophyte View MSA
123427678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain