Gene : Araha.5387s0002 A. halleri v1.1

Defline:  (1 of 4) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  2
Name:  ? Araha.5387s0002 Secondary Identifier:  ? PAC:28854223

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5387s0002 0.5kb upstream 0.5kb upstream 5749 true Scaffold5387: 2458-8206 Arabidopsis halleri
Araha.5387s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5387: 7707-8206 Arabidopsis halleri
Araha.5387s0002 0.5kb downstream 0.5kb downstream 5749 true Scaffold5387: 1958-7706 Arabidopsis halleri
Araha.5387s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5387: 1958-2457 Arabidopsis halleri
Araha.5387s0002 1.0kb upstream 1.0kb upstream 6249 true Scaffold5387: 2458-8706 Arabidopsis halleri
Araha.5387s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5387: 7707-8706 Arabidopsis halleri
Araha.5387s0002 1.0kb downstream 1.0kb downstream 6249 true Scaffold5387: 1458-7706 Arabidopsis halleri
Araha.5387s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5387: 1458-2457 Arabidopsis halleri
Araha.5387s0002 2.0kb upstream 2.0kb upstream 7249 true Scaffold5387: 2458-9706 Arabidopsis halleri
Araha.5387s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5387: 7707-9706 Arabidopsis halleri
Araha.5387s0002 2.0kb downstream 2.0kb downstream 7249 true Scaffold5387: 458-7706 Arabidopsis halleri
Araha.5387s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5387: 458-2457 Arabidopsis halleri
Araha.5387s0002 5.0kb upstream 5.0kb upstream 10249 true Scaffold5387: 2458-12706 Arabidopsis halleri
Araha.5387s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5387: 7707-12706 Arabidopsis halleri
Araha.5387s0002 5.0kb downstream 5.0kb downstream 7706 true Scaffold5387: 1-7706 Arabidopsis halleri
Araha.5387s0002 5.0kb downstream 5.0kb downstream 2457 false Scaffold5387: 1-2457 Arabidopsis halleri
Araha.5387s0002 10.0kb upstream 10.0kb upstream 11872 true Scaffold5387: 2458-14329 Arabidopsis halleri
Araha.5387s0002 10.0kb upstream 10.0kb upstream 6623 false Scaffold5387: 7707-14329 Arabidopsis halleri
Araha.5387s0002 10.0kb downstream 10.0kb downstream 7706 true Scaffold5387: 1-7706 Arabidopsis halleri
Araha.5387s0002 10.0kb downstream 10.0kb downstream 2457 false Scaffold5387: 1-2457 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366040 5261 Brassicaceae View MSA
123838081 5264 Brassicales-Malvales View MSA
124345494 5266 SBM View MSA
124251575 5268 Malvidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain