Gene : Araha.5280s0003 A. halleri v1.1
Defline:  (1 of 50) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3
Name:  ? Araha.5280s0003 Secondary Identifier:  ? PAC:28842859
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5280s0003 0.5kb upstream 0.5kb upstream 2553 true Scaffold5280: 14729-17281 Arabidopsis halleri
Araha.5280s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5280: 14729-15228 Arabidopsis halleri
Araha.5280s0003 0.5kb downstream 0.5kb downstream 2553 true Scaffold5280: 15229-17781 Arabidopsis halleri
Araha.5280s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5280: 17282-17781 Arabidopsis halleri
Araha.5280s0003 1.0kb upstream 1.0kb upstream 3053 true Scaffold5280: 14229-17281 Arabidopsis halleri
Araha.5280s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5280: 14229-15228 Arabidopsis halleri
Araha.5280s0003 1.0kb downstream 1.0kb downstream 3053 true Scaffold5280: 15229-18281 Arabidopsis halleri
Araha.5280s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5280: 17282-18281 Arabidopsis halleri
Araha.5280s0003 2.0kb upstream 2.0kb upstream 4053 true Scaffold5280: 13229-17281 Arabidopsis halleri
Araha.5280s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5280: 13229-15228 Arabidopsis halleri
Araha.5280s0003 2.0kb downstream 2.0kb downstream 4053 true Scaffold5280: 15229-19281 Arabidopsis halleri
Araha.5280s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5280: 17282-19281 Arabidopsis halleri
Araha.5280s0003 5.0kb upstream 5.0kb upstream 7053 true Scaffold5280: 10229-17281 Arabidopsis halleri
Araha.5280s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5280: 10229-15228 Arabidopsis halleri
Araha.5280s0003 5.0kb downstream 5.0kb downstream 7053 true Scaffold5280: 15229-22281 Arabidopsis halleri
Araha.5280s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5280: 17282-22281 Arabidopsis halleri
Araha.5280s0003 10.0kb upstream 10.0kb upstream 12053 true Scaffold5280: 5229-17281 Arabidopsis halleri
Araha.5280s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5280: 5229-15228 Arabidopsis halleri
Araha.5280s0003 10.0kb downstream 10.0kb downstream 12053 true Scaffold5280: 15229-27281 Arabidopsis halleri
Araha.5280s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5280: 17282-27281 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365764 5261 Brassicaceae View MSA
123827653 5264 Brassicales-Malvales View MSA
124343678 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain