Gene : Araha.10007s0012 A. halleri v1.1
Defline:  (1 of 1) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  12
Name:  ? Araha.10007s0012 Secondary Identifier:  ? PAC:28836834
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CAROTENOID-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6475 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10007s0012 0.5kb upstream 0.5kb upstream 3771 true Scaffold10007: 28956-32726 Arabidopsis halleri
Araha.10007s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold10007: 32227-32726 Arabidopsis halleri
Araha.10007s0012 0.5kb downstream 0.5kb downstream 3771 true Scaffold10007: 28456-32226 Arabidopsis halleri
Araha.10007s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold10007: 28456-28955 Arabidopsis halleri
Araha.10007s0012 1.0kb upstream 1.0kb upstream 4271 true Scaffold10007: 28956-33226 Arabidopsis halleri
Araha.10007s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold10007: 32227-33226 Arabidopsis halleri
Araha.10007s0012 1.0kb downstream 1.0kb downstream 4271 true Scaffold10007: 27956-32226 Arabidopsis halleri
Araha.10007s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold10007: 27956-28955 Arabidopsis halleri
Araha.10007s0012 2.0kb upstream 2.0kb upstream 5271 true Scaffold10007: 28956-34226 Arabidopsis halleri
Araha.10007s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold10007: 32227-34226 Arabidopsis halleri
Araha.10007s0012 2.0kb downstream 2.0kb downstream 5271 true Scaffold10007: 26956-32226 Arabidopsis halleri
Araha.10007s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold10007: 26956-28955 Arabidopsis halleri
Araha.10007s0012 5.0kb upstream 5.0kb upstream 6953 true Scaffold10007: 28956-35908 Arabidopsis halleri
Araha.10007s0012 5.0kb upstream 5.0kb upstream 3682 false Scaffold10007: 32227-35908 Arabidopsis halleri
Araha.10007s0012 5.0kb downstream 5.0kb downstream 8271 true Scaffold10007: 23956-32226 Arabidopsis halleri
Araha.10007s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold10007: 23956-28955 Arabidopsis halleri
Araha.10007s0012 10.0kb upstream 10.0kb upstream 6953 true Scaffold10007: 28956-35908 Arabidopsis halleri
Araha.10007s0012 10.0kb upstream 10.0kb upstream 3682 false Scaffold10007: 32227-35908 Arabidopsis halleri
Araha.10007s0012 10.0kb downstream 10.0kb downstream 13271 true Scaffold10007: 18956-32226 Arabidopsis halleri
Araha.10007s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold10007: 18956-28955 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122366550 5261 Brassicaceae View MSA
123829809 5264 Brassicales-Malvales View MSA
124345575 5266 SBM View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain