Gene : Araha.5540s0007 A. halleri v1.1
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  7
Name:  ? Araha.5540s0007 Secondary Identifier:  ? PAC:28859013
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLUCOSE1PMETAB-PWY Arabidopsis halleri pathologic  
Ahalleri GLYCOGENSYNTH-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3801 Arabidopsis halleri pathologic  
Ahalleri PWY-622 Arabidopsis halleri pathologic  
Ahalleri PWY66-422 Arabidopsis halleri pathologic  
Ahalleri PWY-7238 Arabidopsis halleri pathologic  
Ahalleri PWY-7343 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5540s0007 0.5kb upstream 0.5kb upstream 5118 true Scaffold5540: 21074-26191 Arabidopsis halleri
Araha.5540s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5540: 21074-21573 Arabidopsis halleri
Araha.5540s0007 0.5kb downstream 0.5kb downstream 5118 true Scaffold5540: 21574-26691 Arabidopsis halleri
Araha.5540s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5540: 26192-26691 Arabidopsis halleri
Araha.5540s0007 1.0kb upstream 1.0kb upstream 5618 true Scaffold5540: 20574-26191 Arabidopsis halleri
Araha.5540s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5540: 20574-21573 Arabidopsis halleri
Araha.5540s0007 1.0kb downstream 1.0kb downstream 5618 true Scaffold5540: 21574-27191 Arabidopsis halleri
Araha.5540s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5540: 26192-27191 Arabidopsis halleri
Araha.5540s0007 2.0kb upstream 2.0kb upstream 6618 true Scaffold5540: 19574-26191 Arabidopsis halleri
Araha.5540s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5540: 19574-21573 Arabidopsis halleri
Araha.5540s0007 2.0kb downstream 2.0kb downstream 6618 true Scaffold5540: 21574-28191 Arabidopsis halleri
Araha.5540s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5540: 26192-28191 Arabidopsis halleri
Araha.5540s0007 5.0kb upstream 5.0kb upstream 9618 true Scaffold5540: 16574-26191 Arabidopsis halleri
Araha.5540s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold5540: 16574-21573 Arabidopsis halleri
Araha.5540s0007 5.0kb downstream 5.0kb downstream 9618 true Scaffold5540: 21574-31191 Arabidopsis halleri
Araha.5540s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5540: 26192-31191 Arabidopsis halleri
Araha.5540s0007 10.0kb upstream 10.0kb upstream 14618 true Scaffold5540: 11574-26191 Arabidopsis halleri
Araha.5540s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold5540: 11574-21573 Arabidopsis halleri
Araha.5540s0007 10.0kb downstream 10.0kb downstream 14618 true Scaffold5540: 21574-36191 Arabidopsis halleri
Araha.5540s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5540: 26192-36191 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain