Gene : Araha.6424s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  3
Name:  ? Araha.6424s0003 Secondary Identifier:  ? PAC:28843856
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6424s0003 0.5kb upstream 0.5kb upstream 5333 true Scaffold6424: 10070-15402 Arabidopsis halleri
Araha.6424s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6424: 14903-15402 Arabidopsis halleri
Araha.6424s0003 0.5kb downstream 0.5kb downstream 5333 true Scaffold6424: 9570-14902 Arabidopsis halleri
Araha.6424s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6424: 9570-10069 Arabidopsis halleri
Araha.6424s0003 1.0kb upstream 1.0kb upstream 5833 true Scaffold6424: 10070-15902 Arabidopsis halleri
Araha.6424s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6424: 14903-15902 Arabidopsis halleri
Araha.6424s0003 1.0kb downstream 1.0kb downstream 5833 true Scaffold6424: 9070-14902 Arabidopsis halleri
Araha.6424s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6424: 9070-10069 Arabidopsis halleri
Araha.6424s0003 2.0kb upstream 2.0kb upstream 6833 true Scaffold6424: 10070-16902 Arabidopsis halleri
Araha.6424s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6424: 14903-16902 Arabidopsis halleri
Araha.6424s0003 2.0kb downstream 2.0kb downstream 6833 true Scaffold6424: 8070-14902 Arabidopsis halleri
Araha.6424s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6424: 8070-10069 Arabidopsis halleri
Araha.6424s0003 5.0kb upstream 5.0kb upstream 9833 true Scaffold6424: 10070-19902 Arabidopsis halleri
Araha.6424s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6424: 14903-19902 Arabidopsis halleri
Araha.6424s0003 5.0kb downstream 5.0kb downstream 9833 true Scaffold6424: 5070-14902 Arabidopsis halleri
Araha.6424s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6424: 5070-10069 Arabidopsis halleri
Araha.6424s0003 10.0kb upstream 10.0kb upstream 14833 true Scaffold6424: 10070-24902 Arabidopsis halleri
Araha.6424s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6424: 14903-24902 Arabidopsis halleri
Araha.6424s0003 10.0kb downstream 10.0kb downstream 14833 true Scaffold6424: 70-14902 Arabidopsis halleri
Araha.6424s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6424: 70-10069 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361785 5261 Brassicaceae View MSA
123836380 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain