Gene : Araha.5748s0001 A. halleri v1.1

Defline:  (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1
Name:  ? Araha.5748s0001 Secondary Identifier:  ? PAC:28859454

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5748s0001 0.5kb upstream 0.5kb upstream 2423 true Scaffold5748: 29-2451 Arabidopsis halleri
Araha.5748s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5748: 1952-2451 Arabidopsis halleri
Araha.5748s0001 0.5kb downstream 0.5kb downstream 1951 true Scaffold5748: 1-1951 Arabidopsis halleri
Araha.5748s0001 0.5kb downstream 0.5kb downstream 28 false Scaffold5748: 1-28 Arabidopsis halleri
Araha.5748s0001 1.0kb upstream 1.0kb upstream 2923 true Scaffold5748: 29-2951 Arabidopsis halleri
Araha.5748s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5748: 1952-2951 Arabidopsis halleri
Araha.5748s0001 1.0kb downstream 1.0kb downstream 1951 true Scaffold5748: 1-1951 Arabidopsis halleri
Araha.5748s0001 1.0kb downstream 1.0kb downstream 28 false Scaffold5748: 1-28 Arabidopsis halleri
Araha.5748s0001 2.0kb upstream 2.0kb upstream 3923 true Scaffold5748: 29-3951 Arabidopsis halleri
Araha.5748s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5748: 1952-3951 Arabidopsis halleri
Araha.5748s0001 2.0kb downstream 2.0kb downstream 1951 true Scaffold5748: 1-1951 Arabidopsis halleri
Araha.5748s0001 2.0kb downstream 2.0kb downstream 28 false Scaffold5748: 1-28 Arabidopsis halleri
Araha.5748s0001 5.0kb upstream 5.0kb upstream 6923 true Scaffold5748: 29-6951 Arabidopsis halleri
Araha.5748s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5748: 1952-6951 Arabidopsis halleri
Araha.5748s0001 5.0kb downstream 5.0kb downstream 1951 true Scaffold5748: 1-1951 Arabidopsis halleri
Araha.5748s0001 5.0kb downstream 5.0kb downstream 28 false Scaffold5748: 1-28 Arabidopsis halleri
Araha.5748s0001 10.0kb upstream 10.0kb upstream 11923 true Scaffold5748: 29-11951 Arabidopsis halleri
Araha.5748s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5748: 1952-11951 Arabidopsis halleri
Araha.5748s0001 10.0kb downstream 10.0kb downstream 1951 true Scaffold5748: 1-1951 Arabidopsis halleri
Araha.5748s0001 10.0kb downstream 10.0kb downstream 28 false Scaffold5748: 1-28 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026493 5273 Angiosperm View MSA
122361229 5261 Brassicaceae View MSA
123827951 5264 Brassicales-Malvales View MSA
124345101 5266 SBM View MSA
124238628 5268 Malvidae View MSA
124068457 5270 Rosid View MSA
123738065 5271 Pentapetalae View MSA
122785849 5272 Eudicot View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain