Gene : Araha.5748s0002 A. halleri v1.1
Defline:  (1 of 3) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  2
Name:  ? Araha.5748s0002 Secondary Identifier:  ? PAC:28859457
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5748s0002 0.5kb upstream 0.5kb upstream 5763 true Scaffold5748: 1655-7417 Arabidopsis halleri
Araha.5748s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5748: 1655-2154 Arabidopsis halleri
Araha.5748s0002 0.5kb downstream 0.5kb downstream 5763 true Scaffold5748: 2155-7917 Arabidopsis halleri
Araha.5748s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5748: 7418-7917 Arabidopsis halleri
Araha.5748s0002 1.0kb upstream 1.0kb upstream 6263 true Scaffold5748: 1155-7417 Arabidopsis halleri
Araha.5748s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5748: 1155-2154 Arabidopsis halleri
Araha.5748s0002 1.0kb downstream 1.0kb downstream 6263 true Scaffold5748: 2155-8417 Arabidopsis halleri
Araha.5748s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5748: 7418-8417 Arabidopsis halleri
Araha.5748s0002 2.0kb upstream 2.0kb upstream 7263 true Scaffold5748: 155-7417 Arabidopsis halleri
Araha.5748s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5748: 155-2154 Arabidopsis halleri
Araha.5748s0002 2.0kb downstream 2.0kb downstream 7263 true Scaffold5748: 2155-9417 Arabidopsis halleri
Araha.5748s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5748: 7418-9417 Arabidopsis halleri
Araha.5748s0002 5.0kb upstream 5.0kb upstream 7417 true Scaffold5748: 1-7417 Arabidopsis halleri
Araha.5748s0002 5.0kb upstream 5.0kb upstream 2154 false Scaffold5748: 1-2154 Arabidopsis halleri
Araha.5748s0002 5.0kb downstream 5.0kb downstream 10263 true Scaffold5748: 2155-12417 Arabidopsis halleri
Araha.5748s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5748: 7418-12417 Arabidopsis halleri
Araha.5748s0002 10.0kb upstream 10.0kb upstream 7417 true Scaffold5748: 1-7417 Arabidopsis halleri
Araha.5748s0002 10.0kb upstream 10.0kb upstream 2154 false Scaffold5748: 1-2154 Arabidopsis halleri
Araha.5748s0002 10.0kb downstream 10.0kb downstream 15263 true Scaffold5748: 2155-17417 Arabidopsis halleri
Araha.5748s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold5748: 7418-17417 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain