Gene : Araha.11126s0012 A. halleri v1.1
Defline:  (1 of 1) PTHR30075:SF3 - GLYCINE--TRNA LIGASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  12
Name:  ? Araha.11126s0012 Secondary Identifier:  ? PAC:28842091
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11126s0012 0.5kb upstream 0.5kb upstream 8257 true Scaffold11126: 66284-74540 Arabidopsis halleri
Araha.11126s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold11126: 74041-74540 Arabidopsis halleri
Araha.11126s0012 0.5kb downstream 0.5kb downstream 8257 true Scaffold11126: 65784-74040 Arabidopsis halleri
Araha.11126s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold11126: 65784-66283 Arabidopsis halleri
Araha.11126s0012 1.0kb upstream 1.0kb upstream 8757 true Scaffold11126: 66284-75040 Arabidopsis halleri
Araha.11126s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold11126: 74041-75040 Arabidopsis halleri
Araha.11126s0012 1.0kb downstream 1.0kb downstream 8757 true Scaffold11126: 65284-74040 Arabidopsis halleri
Araha.11126s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold11126: 65284-66283 Arabidopsis halleri
Araha.11126s0012 2.0kb upstream 2.0kb upstream 9757 true Scaffold11126: 66284-76040 Arabidopsis halleri
Araha.11126s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold11126: 74041-76040 Arabidopsis halleri
Araha.11126s0012 2.0kb downstream 2.0kb downstream 9757 true Scaffold11126: 64284-74040 Arabidopsis halleri
Araha.11126s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold11126: 64284-66283 Arabidopsis halleri
Araha.11126s0012 5.0kb upstream 5.0kb upstream 12757 true Scaffold11126: 66284-79040 Arabidopsis halleri
Araha.11126s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold11126: 74041-79040 Arabidopsis halleri
Araha.11126s0012 5.0kb downstream 5.0kb downstream 12757 true Scaffold11126: 61284-74040 Arabidopsis halleri
Araha.11126s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold11126: 61284-66283 Arabidopsis halleri
Araha.11126s0012 10.0kb upstream 10.0kb upstream 17757 true Scaffold11126: 66284-84040 Arabidopsis halleri
Araha.11126s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold11126: 74041-84040 Arabidopsis halleri
Araha.11126s0012 10.0kb downstream 10.0kb downstream 17757 true Scaffold11126: 56284-74040 Arabidopsis halleri
Araha.11126s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold11126: 56284-66283 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373886 5261 Brassicaceae View MSA
123827423 5264 Brassicales-Malvales View MSA
124321462 5266 SBM View MSA
124246630 5268 Malvidae View MSA
124065651 5270 Rosid View MSA
123740680 5271 Pentapetalae View MSA
122789566 5272 Eudicot View MSA
122042333 5273 Angiosperm View MSA
121346597 5274 Embryophyte View MSA
123423909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain