Gene : Araha.5658s0001 A. halleri v1.1
Defline:  (1 of 6) PF06830 - Root cap (Root_cap) Genomic Order:  1
Name:  ? Araha.5658s0001 Secondary Identifier:  ? PAC:28860781
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5658s0001 0.5kb upstream 0.5kb upstream 2350 true Scaffold5658: 210-2559 Arabidopsis halleri
Araha.5658s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5658: 2060-2559 Arabidopsis halleri
Araha.5658s0001 0.5kb downstream 0.5kb downstream 2059 true Scaffold5658: 1-2059 Arabidopsis halleri
Araha.5658s0001 0.5kb downstream 0.5kb downstream 209 false Scaffold5658: 1-209 Arabidopsis halleri
Araha.5658s0001 1.0kb upstream 1.0kb upstream 2850 true Scaffold5658: 210-3059 Arabidopsis halleri
Araha.5658s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5658: 2060-3059 Arabidopsis halleri
Araha.5658s0001 1.0kb downstream 1.0kb downstream 2059 true Scaffold5658: 1-2059 Arabidopsis halleri
Araha.5658s0001 1.0kb downstream 1.0kb downstream 209 false Scaffold5658: 1-209 Arabidopsis halleri
Araha.5658s0001 2.0kb upstream 2.0kb upstream 3850 true Scaffold5658: 210-4059 Arabidopsis halleri
Araha.5658s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5658: 2060-4059 Arabidopsis halleri
Araha.5658s0001 2.0kb downstream 2.0kb downstream 2059 true Scaffold5658: 1-2059 Arabidopsis halleri
Araha.5658s0001 2.0kb downstream 2.0kb downstream 209 false Scaffold5658: 1-209 Arabidopsis halleri
Araha.5658s0001 5.0kb upstream 5.0kb upstream 6850 true Scaffold5658: 210-7059 Arabidopsis halleri
Araha.5658s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5658: 2060-7059 Arabidopsis halleri
Araha.5658s0001 5.0kb downstream 5.0kb downstream 2059 true Scaffold5658: 1-2059 Arabidopsis halleri
Araha.5658s0001 5.0kb downstream 5.0kb downstream 209 false Scaffold5658: 1-209 Arabidopsis halleri
Araha.5658s0001 10.0kb upstream 10.0kb upstream 11850 true Scaffold5658: 210-12059 Arabidopsis halleri
Araha.5658s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5658: 2060-12059 Arabidopsis halleri
Araha.5658s0001 10.0kb downstream 10.0kb downstream 2059 true Scaffold5658: 1-2059 Arabidopsis halleri
Araha.5658s0001 10.0kb downstream 10.0kb downstream 209 false Scaffold5658: 1-209 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378455 5261 Brassicaceae View MSA
123835508 5264 Brassicales-Malvales View MSA
124343084 5266 SBM View MSA
124246752 5268 Malvidae View MSA
124061597 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain