Gene : Araha.5597s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A Genomic Order:  5
Name:  ? Araha.5597s0005 Secondary Identifier:  ? PAC:28838742

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5597s0005 0.5kb upstream 0.5kb upstream 3340 true Scaffold5597: 17483-20822 Arabidopsis halleri
Araha.5597s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5597: 20323-20822 Arabidopsis halleri
Araha.5597s0005 0.5kb downstream 0.5kb downstream 3340 true Scaffold5597: 16983-20322 Arabidopsis halleri
Araha.5597s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5597: 16983-17482 Arabidopsis halleri
Araha.5597s0005 1.0kb upstream 1.0kb upstream 3840 true Scaffold5597: 17483-21322 Arabidopsis halleri
Araha.5597s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5597: 20323-21322 Arabidopsis halleri
Araha.5597s0005 1.0kb downstream 1.0kb downstream 3840 true Scaffold5597: 16483-20322 Arabidopsis halleri
Araha.5597s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5597: 16483-17482 Arabidopsis halleri
Araha.5597s0005 2.0kb upstream 2.0kb upstream 4840 true Scaffold5597: 17483-22322 Arabidopsis halleri
Araha.5597s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5597: 20323-22322 Arabidopsis halleri
Araha.5597s0005 2.0kb downstream 2.0kb downstream 4840 true Scaffold5597: 15483-20322 Arabidopsis halleri
Araha.5597s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5597: 15483-17482 Arabidopsis halleri
Araha.5597s0005 5.0kb upstream 5.0kb upstream 7840 true Scaffold5597: 17483-25322 Arabidopsis halleri
Araha.5597s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5597: 20323-25322 Arabidopsis halleri
Araha.5597s0005 5.0kb downstream 5.0kb downstream 7840 true Scaffold5597: 12483-20322 Arabidopsis halleri
Araha.5597s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5597: 12483-17482 Arabidopsis halleri
Araha.5597s0005 10.0kb upstream 10.0kb upstream 12840 true Scaffold5597: 17483-30322 Arabidopsis halleri
Araha.5597s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5597: 20323-30322 Arabidopsis halleri
Araha.5597s0005 10.0kb downstream 10.0kb downstream 12840 true Scaffold5597: 7483-20322 Arabidopsis halleri
Araha.5597s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5597: 7483-17482 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370783 5261 Brassicaceae View MSA
123832962 5264 Brassicales-Malvales View MSA
124340434 5266 SBM View MSA
124239796 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain