Protein Family : RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 123423860

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  181

181 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29827.t000073 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED R. communis v0.1 3635   29827: 392900-396534
29912.t000002 (1 of 1) PTHR23273//PTHR23273:SF15 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A R. communis v0.1 2811   29912: 33450-36260
Cucsa.322340 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. sativus v1.0 4352   scaffold03080: 2118306-2122657
Cucsa.117220 (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A C. sativus v1.0 3887   scaffold00995: 876365-880251
orange1.1g006263m.g (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A C. sinensis v1.1 3952   scaffold00140: 345600-349551
orange1.1g003281m.g (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. sinensis v1.1 2836   scaffold00210: 109141-111976
AT4G19130 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. thaliana TAIR10 2616   Chr4: 10466477-10469092
AT5G45400 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. thaliana TAIR10 RPA70C 2655   Chr5: 18398990-18401644
AT2G06510 (1 of 1) PTHR23273//PTHR23273:SF15 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A A. thaliana TAIR10 RPA1A 2669   Chr2: 2585018-2587686
Thhalv10024555m.g (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED E. salsugineum v1.0 2302   scaffold_1: 8995907-8998208
Thhalv10001929m.g (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A E. salsugineum v1.0 3216   scaffold_12: 10711781-10714996
Thhalv10000781m.g (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED E. salsugineum v1.0 2619   scaffold_20: 1142861-1145479
Ciclev10000254m.g (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. clementina v1.0 2993   scaffold_5: 24381727-24384719
Ciclev10010492m.g (1 of 2) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A C. clementina v1.0 2502   scaffold_1: 12045357-12047858
Lus10023805.g (1 of 2) PF00098//PF01336//PF04057//PF08646//PF16900 - Zinc knuckle (zf-CCHC) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 2904   scaffold205: 783348-786251
Lus10003955.g (1 of 2) PF00098//PF01336//PF04057//PF08646//PF16900 - Zinc knuckle (zf-CCHC) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 2834   scaffold437: 12155-14988
Lus10033272.g (1 of 2) PF04057//PF08646//PF16900 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 6180   scaffold488: 350097-356276
Lus10033436.g (1 of 2) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A L. usitatissimum v1.0 2098   scaffold488: 1360753-1362850
Gorai.013G225700 (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A G. raimondii v2.1 3452   Chr13: 54526447-54529898
Gorai.008G220300 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED G. raimondii v2.1 3807   Chr08: 50709437-50713243
e_gw1.15.253.1 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. subellipsoidea C-169 v2.0 5263   scaffold_15: 466459-471721
estExt_Genewise1.C_4_t10067 (1 of 2) PTHR23273 - REPLICATION FACTOR A 1, RFA1 M. pusilla CCMP1545 v3.0 2519   scaffold_4: 61629-64147
estExt_fgenesh2_pg.C_Chr_040475 (1 of 1) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins M. sp RCC299 v3.0 3023   Chr_04: 1505714-1508736
estExt_GenewiseEukaryote.C_Chr_140051 (1 of 3) PTHR23273 - REPLICATION FACTOR A 1, RFA1 O. lucimarinus v2.0 2171   Chr_14: 189918-192088
e_gwEuk.14.40.1 (1 of 3) PTHR23273 - REPLICATION FACTOR A 1, RFA1 O. lucimarinus v2.0 2141   Chr_14: 332774-334914
Thecc1EG016675 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED T. cacao v1.1 4382   scaffold_3: 33936856-33941237
Thecc1EG037567 (1 of 2) PTHR23273//PTHR23273:SF15 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A T. cacao v1.1 3239   scaffold_9: 4187186-4190424
Migut.J00947 (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A M. guttatus v2.0 3471   scaffold_10: 5664923-5668393
Migut.A00558 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED M. guttatus v2.0 3966   scaffold_1: 2913038-2917003
Araha.1483s0003 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. halleri v1.1 2844   Scaffold1483: 10515-13358

181 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29827.m002600 R. communis v0.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
29912.m005276 R. communis v0.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Cucsa.322340.1 C. sativus v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Cucsa.117220.1 C. sativus v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
orange1.1g006263m C. sinensis v1.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
orange1.1g003281m C. sinensis v1.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
AT4G19130.1 A. thaliana TAIR10 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
AT5G45400.1 A. thaliana TAIR10 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
AT2G06510.1 A. thaliana TAIR10 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
Thhalv10024555m E. salsugineum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
Thhalv10001929m E. salsugineum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
Thhalv10000781m E. salsugineum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae
Ciclev10000254m C. clementina v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Ciclev10010492m C. clementina v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Lus10023805 L. usitatissimum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 4 5275 Viridiplantae
Lus10003955 L. usitatissimum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 4 5275 Viridiplantae
Lus10033272 L. usitatissimum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 4 5275 Viridiplantae
Lus10033436 L. usitatissimum v1.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 4 5275 Viridiplantae
Gorai.013G225700.1 G. raimondii v2.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Gorai.008G220300.1 G. raimondii v2.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
18576 C. subellipsoidea C-169 v2.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 1 5275 Viridiplantae
168985 M. pusilla CCMP1545 v3.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 1 5275 Viridiplantae
105511 M. sp RCC299 v3.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 1 5275 Viridiplantae
47438 O. lucimarinus v2.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
43365 O. lucimarinus v2.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Thecc1EG016675t1 T. cacao v1.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Thecc1EG037567t1 T. cacao v1.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Migut.J00947.1.p M. guttatus v2.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Migut.A00558.1.p M. guttatus v2.0 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 2 5275 Viridiplantae
Araha.1483s0003.1.p A. halleri v1.1 123423860 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed 3 5275 Viridiplantae