Gene : AT4G19130 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED Genomic Order:  1866
Name:  ? AT4G19130 Secondary Identifier:  ? PAC:19649058
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19130 0.5kb upstream 0.5kb upstream 3116 true Chr4: 10466477-10469592 Arabidopsis thaliana
AT4G19130 0.5kb upstream 0.5kb upstream 500 false Chr4: 10469093-10469592 Arabidopsis thaliana
AT4G19130 0.5kb downstream 0.5kb downstream 3116 true Chr4: 10465977-10469092 Arabidopsis thaliana
AT4G19130 0.5kb downstream 0.5kb downstream 500 false Chr4: 10465977-10466476 Arabidopsis thaliana
AT4G19130 1.0kb upstream 1.0kb upstream 3616 true Chr4: 10466477-10470092 Arabidopsis thaliana
AT4G19130 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10469093-10470092 Arabidopsis thaliana
AT4G19130 1.0kb downstream 1.0kb downstream 3616 true Chr4: 10465477-10469092 Arabidopsis thaliana
AT4G19130 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10465477-10466476 Arabidopsis thaliana
AT4G19130 2.0kb upstream 2.0kb upstream 4616 true Chr4: 10466477-10471092 Arabidopsis thaliana
AT4G19130 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10469093-10471092 Arabidopsis thaliana
AT4G19130 2.0kb downstream 2.0kb downstream 4616 true Chr4: 10464477-10469092 Arabidopsis thaliana
AT4G19130 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10464477-10466476 Arabidopsis thaliana
AT4G19130 5.0kb upstream 5.0kb upstream 7616 true Chr4: 10466477-10474092 Arabidopsis thaliana
AT4G19130 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10469093-10474092 Arabidopsis thaliana
AT4G19130 5.0kb downstream 5.0kb downstream 7616 true Chr4: 10461477-10469092 Arabidopsis thaliana
AT4G19130 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10461477-10466476 Arabidopsis thaliana
AT4G19130 10.0kb upstream 10.0kb upstream 12616 true Chr4: 10466477-10479092 Arabidopsis thaliana
AT4G19130 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10469093-10479092 Arabidopsis thaliana
AT4G19130 10.0kb downstream 10.0kb downstream 12616 true Chr4: 10456477-10469092 Arabidopsis thaliana
AT4G19130 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10456477-10466476 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367883 5261 Brassicaceae View MSA
123836106 5264 Brassicales-Malvales View MSA
124341565 5266 SBM View MSA
124242896 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.473        
cufflinks 0.819        
cufflinks 0.374        
cufflinks 1.198       High
cufflinks 0.269       Low
cufflinks 1.139       High

0 Strain