Protein Family : Replication factor-A protein 1-related 124242896

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  29

29 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29827.t000073 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED R. communis v0.1 3635   29827: 392900-396534
orange1.1g003281m.g (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. sinensis v1.1 2836   scaffold00210: 109141-111976
AT4G19130 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. thaliana TAIR10 2616   Chr4: 10466477-10469092
AT5G45400 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. thaliana TAIR10 RPA70C 2655   Chr5: 18398990-18401644
Thhalv10024555m.g (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED E. salsugineum v1.0 2302   scaffold_1: 8995907-8998208
Thhalv10000781m.g (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED E. salsugineum v1.0 2619   scaffold_20: 1142861-1145479
Ciclev10000254m.g (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. clementina v1.0 2993   scaffold_5: 24381727-24384719
Lus10023805.g (1 of 2) PF00098//PF01336//PF04057//PF08646//PF16900 - Zinc knuckle (zf-CCHC) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 2904   scaffold205: 783348-786251
Lus10003955.g (1 of 2) PF00098//PF01336//PF04057//PF08646//PF16900 - Zinc knuckle (zf-CCHC) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 2834   scaffold437: 12155-14988
Lus10033272.g (1 of 2) PF04057//PF08646//PF16900 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) L. usitatissimum v1.0 6180   scaffold488: 350097-356276
Gorai.008G220300 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED G. raimondii v2.1 3807   Chr08: 50709437-50713243
Thecc1EG016675 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED T. cacao v1.1 4382   scaffold_3: 33936856-33941237
Araha.1483s0003 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. halleri v1.1 2844   Scaffold1483: 10515-13358
Araha.3950s0001 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. halleri v1.1 2452   Scaffold3950: 5-2456
Cagra.0493s0017 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. grandiflora v1.1 2996   Scaffold493: 73221-76216
Cagra.9536s0024 (1 of 1) KOG0487 - Transcription factor Abd-B, contains HOX domain C. grandiflora v1.1 3320   Scaffold9536: 86331-89650
Brara.B02832 (1 of 3) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED B. rapa FPsc v1.3 2794   A02: 22345262-22348055
Brara.I01893 (1 of 3) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED B. rapa FPsc v1.3 2540   A09: 13666631-13669170
Brara.K01752 (1 of 3) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED B. rapa FPsc v1.3 2576   Scaffold87669: 84083-86658
Bostr.30275s0395 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED B. stricta v1.2 3259   Scaffold30275: 2425308-2428566
Bostr.8819s0061 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED B. stricta v1.2 2995   Scaffold8819: 559813-562807
SapurV1A.0894s0040 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED S. purpurea v1.0 3429   chr03: 9145459-9148887
Manes.17G003800 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED M. esculenta v6.1 3392   Chromosome17: 1007990-1011381
AL1G45720 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. lyrata v2.1 2961   scaffold_1: 14302140-14305100
AL7G34960 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED A. lyrata v2.1 2943   scaffold_7: 10376998-10379940
Potri.003G102700 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED P. trichocarpa v3.1 3436   Chr03: 12821814-12825249
Podel.03G108900 (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED P. deltoides WV94 v2.1 3449   Chr03: 12683313-12686761
Carub.0008s0271 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. rubella v1.1 2862   scaffold_8: 1057370-1060231
Carub.0007s2202 (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED C. rubella v1.1 3305   scaffold_7: 8337283-8340587

29 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G45400.1 A. thaliana TAIR10 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Thhalv10000781m E. salsugineum v1.0 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Cagra.0493s0017.1.p C. grandiflora v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Brara.I01893.1.p B. rapa FPsc v1.3 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
Bostr.30275s0395.1.p B. stricta v1.2 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Bostr.8819s0061.1.p B. stricta v1.2 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
AL1G45720.t1 A. lyrata v2.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Potri.003G102700.1.p P. trichocarpa v3.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
Podel.03G108900.1.p P. deltoides WV94 v2.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
29827.m002600 R. communis v0.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
orange1.1g003281m C. sinensis v1.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
AT4G19130.1 A. thaliana TAIR10 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Thhalv10024555m E. salsugineum v1.0 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Ciclev10000254m C. clementina v1.0 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
Lus10023805 L. usitatissimum v1.0 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
Lus10033272 L. usitatissimum v1.0 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
Lus10003955 L. usitatissimum v1.0 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
Gorai.008G220300.1 G. raimondii v2.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
Thecc1EG016675t1 T. cacao v1.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
Araha.1483s0003.1.p A. halleri v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Araha.3950s0001.1.p A. halleri v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Cagra.9536s0024.1.p C. grandiflora v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Brara.K01752.1.p B. rapa FPsc v1.3 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
Brara.B02832.1.p B. rapa FPsc v1.3 124242896 Replication factor-A protein 1-related 3 5268 Malvidae
SapurV1A.0894s0040.1.p S. purpurea v1.0 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
Manes.17G003800.1.p M. esculenta v6.1 124242896 Replication factor-A protein 1-related 1 5268 Malvidae
AL7G34960.t1 A. lyrata v2.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Carub.0008s0271.1.p C. rubella v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae
Carub.0007s2202.1.p C. rubella v1.1 124242896 Replication factor-A protein 1-related 2 5268 Malvidae