Gene : Thecc1EG016675 T. cacao v1.1
Defline:  (1 of 1) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED Genomic Order:  3119
Name:  ? Thecc1EG016675 Secondary Identifier:  ? PAC:27450413
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016675 0.5kb upstream 0.5kb upstream 4882 true scaffold_3: 33936856-33941737 Theobroma cacao
Thecc1EG016675 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33941238-33941737 Theobroma cacao
Thecc1EG016675 0.5kb downstream 0.5kb downstream 4882 true scaffold_3: 33936356-33941237 Theobroma cacao
Thecc1EG016675 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33936356-33936855 Theobroma cacao
Thecc1EG016675 1.0kb upstream 1.0kb upstream 5382 true scaffold_3: 33936856-33942237 Theobroma cacao
Thecc1EG016675 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33941238-33942237 Theobroma cacao
Thecc1EG016675 1.0kb downstream 1.0kb downstream 5382 true scaffold_3: 33935856-33941237 Theobroma cacao
Thecc1EG016675 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33935856-33936855 Theobroma cacao
Thecc1EG016675 2.0kb upstream 2.0kb upstream 6382 true scaffold_3: 33936856-33943237 Theobroma cacao
Thecc1EG016675 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33941238-33943237 Theobroma cacao
Thecc1EG016675 2.0kb downstream 2.0kb downstream 6382 true scaffold_3: 33934856-33941237 Theobroma cacao
Thecc1EG016675 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33934856-33936855 Theobroma cacao
Thecc1EG016675 5.0kb upstream 5.0kb upstream 9382 true scaffold_3: 33936856-33946237 Theobroma cacao
Thecc1EG016675 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33941238-33946237 Theobroma cacao
Thecc1EG016675 5.0kb downstream 5.0kb downstream 9382 true scaffold_3: 33931856-33941237 Theobroma cacao
Thecc1EG016675 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33931856-33936855 Theobroma cacao
Thecc1EG016675 10.0kb upstream 10.0kb upstream 14382 true scaffold_3: 33936856-33951237 Theobroma cacao
Thecc1EG016675 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33941238-33951237 Theobroma cacao
Thecc1EG016675 10.0kb downstream 10.0kb downstream 14382 true scaffold_3: 33926856-33941237 Theobroma cacao
Thecc1EG016675 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33926856-33936855 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836106 5264 Brassicales-Malvales View MSA
124341565 5266 SBM View MSA
124242896 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain