Gene : Carub.0007s2202 C. rubella v1.1
Defline:  (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED Genomic Order:  2202
Name:  ? Carub.0007s2202 Secondary Identifier:  ? PAC:39235689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2202 0.5kb upstream 0.5kb upstream 3805 true scaffold_7: 8336783-8340587 Capsella rubella
Carub.0007s2202 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8336783-8337282 Capsella rubella
Carub.0007s2202 0.5kb downstream 0.5kb downstream 3805 true scaffold_7: 8337283-8341087 Capsella rubella
Carub.0007s2202 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8340588-8341087 Capsella rubella
Carub.0007s2202 1.0kb upstream 1.0kb upstream 4305 true scaffold_7: 8336283-8340587 Capsella rubella
Carub.0007s2202 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8336283-8337282 Capsella rubella
Carub.0007s2202 1.0kb downstream 1.0kb downstream 4305 true scaffold_7: 8337283-8341587 Capsella rubella
Carub.0007s2202 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8340588-8341587 Capsella rubella
Carub.0007s2202 2.0kb upstream 2.0kb upstream 5305 true scaffold_7: 8335283-8340587 Capsella rubella
Carub.0007s2202 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8335283-8337282 Capsella rubella
Carub.0007s2202 2.0kb downstream 2.0kb downstream 5305 true scaffold_7: 8337283-8342587 Capsella rubella
Carub.0007s2202 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8340588-8342587 Capsella rubella
Carub.0007s2202 5.0kb upstream 5.0kb upstream 8305 true scaffold_7: 8332283-8340587 Capsella rubella
Carub.0007s2202 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8332283-8337282 Capsella rubella
Carub.0007s2202 5.0kb downstream 5.0kb downstream 8305 true scaffold_7: 8337283-8345587 Capsella rubella
Carub.0007s2202 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8340588-8345587 Capsella rubella
Carub.0007s2202 10.0kb upstream 10.0kb upstream 13305 true scaffold_7: 8327283-8340587 Capsella rubella
Carub.0007s2202 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8327283-8337282 Capsella rubella
Carub.0007s2202 10.0kb downstream 10.0kb downstream 13305 true scaffold_7: 8337283-8350587 Capsella rubella
Carub.0007s2202 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8340588-8350587 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367883 5261 Brassicaceae View MSA
123836106 5264 Brassicales-Malvales View MSA
124341565 5266 SBM View MSA
124242896 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain