Gene : Cagra.0493s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23273:SF12 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED Genomic Order:  17
Name:  ? Cagra.0493s0017 Secondary Identifier:  ? PAC:28902936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0493s0017 0.5kb upstream 0.5kb upstream 3496 true Scaffold493: 72721-76216 Capsella grandiflora
Cagra.0493s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold493: 72721-73220 Capsella grandiflora
Cagra.0493s0017 0.5kb downstream 0.5kb downstream 3496 true Scaffold493: 73221-76716 Capsella grandiflora
Cagra.0493s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold493: 76217-76716 Capsella grandiflora
Cagra.0493s0017 1.0kb upstream 1.0kb upstream 3996 true Scaffold493: 72221-76216 Capsella grandiflora
Cagra.0493s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold493: 72221-73220 Capsella grandiflora
Cagra.0493s0017 1.0kb downstream 1.0kb downstream 3996 true Scaffold493: 73221-77216 Capsella grandiflora
Cagra.0493s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold493: 76217-77216 Capsella grandiflora
Cagra.0493s0017 2.0kb upstream 2.0kb upstream 4996 true Scaffold493: 71221-76216 Capsella grandiflora
Cagra.0493s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold493: 71221-73220 Capsella grandiflora
Cagra.0493s0017 2.0kb downstream 2.0kb downstream 4996 true Scaffold493: 73221-78216 Capsella grandiflora
Cagra.0493s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold493: 76217-78216 Capsella grandiflora
Cagra.0493s0017 5.0kb upstream 5.0kb upstream 7996 true Scaffold493: 68221-76216 Capsella grandiflora
Cagra.0493s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold493: 68221-73220 Capsella grandiflora
Cagra.0493s0017 5.0kb downstream 5.0kb downstream 7996 true Scaffold493: 73221-81216 Capsella grandiflora
Cagra.0493s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold493: 76217-81216 Capsella grandiflora
Cagra.0493s0017 10.0kb upstream 10.0kb upstream 12996 true Scaffold493: 63221-76216 Capsella grandiflora
Cagra.0493s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold493: 63221-73220 Capsella grandiflora
Cagra.0493s0017 10.0kb downstream 10.0kb downstream 12996 true Scaffold493: 73221-86216 Capsella grandiflora
Cagra.0493s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold493: 76217-86216 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379708 5261 Brassicaceae View MSA
123836106 5264 Brassicales-Malvales View MSA
124341565 5266 SBM View MSA
124242896 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain