Gene : Cucsa.117220 C. sativus v1.0
Defline:  (1 of 1) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A Genomic Order:  114
Name:  ? Cucsa.117220 Secondary Identifier:  ? PAC:16960708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.117220 0.5kb upstream 0.5kb upstream 4387 true scaffold00995: 876365-880751 Cucumis sativus
Cucsa.117220 0.5kb upstream 0.5kb upstream 500 false scaffold00995: 880252-880751 Cucumis sativus
Cucsa.117220 0.5kb downstream 0.5kb downstream 4387 true scaffold00995: 875865-880251 Cucumis sativus
Cucsa.117220 0.5kb downstream 0.5kb downstream 500 false scaffold00995: 875865-876364 Cucumis sativus
Cucsa.117220 1.0kb upstream 1.0kb upstream 4887 true scaffold00995: 876365-881251 Cucumis sativus
Cucsa.117220 1.0kb upstream 1.0kb upstream 1000 false scaffold00995: 880252-881251 Cucumis sativus
Cucsa.117220 1.0kb downstream 1.0kb downstream 4887 true scaffold00995: 875365-880251 Cucumis sativus
Cucsa.117220 1.0kb downstream 1.0kb downstream 1000 false scaffold00995: 875365-876364 Cucumis sativus
Cucsa.117220 2.0kb upstream 2.0kb upstream 5887 true scaffold00995: 876365-882251 Cucumis sativus
Cucsa.117220 2.0kb upstream 2.0kb upstream 2000 false scaffold00995: 880252-882251 Cucumis sativus
Cucsa.117220 2.0kb downstream 2.0kb downstream 5887 true scaffold00995: 874365-880251 Cucumis sativus
Cucsa.117220 2.0kb downstream 2.0kb downstream 2000 false scaffold00995: 874365-876364 Cucumis sativus
Cucsa.117220 5.0kb upstream 5.0kb upstream 8887 true scaffold00995: 876365-885251 Cucumis sativus
Cucsa.117220 5.0kb upstream 5.0kb upstream 5000 false scaffold00995: 880252-885251 Cucumis sativus
Cucsa.117220 5.0kb downstream 5.0kb downstream 8887 true scaffold00995: 871365-880251 Cucumis sativus
Cucsa.117220 5.0kb downstream 5.0kb downstream 5000 false scaffold00995: 871365-876364 Cucumis sativus
Cucsa.117220 10.0kb upstream 10.0kb upstream 13887 true scaffold00995: 876365-890251 Cucumis sativus
Cucsa.117220 10.0kb upstream 10.0kb upstream 10000 false scaffold00995: 880252-890251 Cucumis sativus
Cucsa.117220 10.0kb downstream 10.0kb downstream 13887 true scaffold00995: 866365-880251 Cucumis sativus
Cucsa.117220 10.0kb downstream 10.0kb downstream 10000 false scaffold00995: 866365-876364 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299681 5265 Fabidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain