Gene : Thecc1EG037567 T. cacao v1.1
Defline:  (1 of 2) PTHR23273//PTHR23273:SF15 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A Genomic Order:  764
Name:  ? Thecc1EG037567 Secondary Identifier:  ? PAC:27428110
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037567 0.5kb upstream 0.5kb upstream 3739 true scaffold_9: 4186686-4190424 Theobroma cacao
Thecc1EG037567 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4186686-4187185 Theobroma cacao
Thecc1EG037567 0.5kb downstream 0.5kb downstream 3739 true scaffold_9: 4187186-4190924 Theobroma cacao
Thecc1EG037567 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4190425-4190924 Theobroma cacao
Thecc1EG037567 1.0kb upstream 1.0kb upstream 4239 true scaffold_9: 4186186-4190424 Theobroma cacao
Thecc1EG037567 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4186186-4187185 Theobroma cacao
Thecc1EG037567 1.0kb downstream 1.0kb downstream 4239 true scaffold_9: 4187186-4191424 Theobroma cacao
Thecc1EG037567 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4190425-4191424 Theobroma cacao
Thecc1EG037567 2.0kb upstream 2.0kb upstream 5239 true scaffold_9: 4185186-4190424 Theobroma cacao
Thecc1EG037567 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4185186-4187185 Theobroma cacao
Thecc1EG037567 2.0kb downstream 2.0kb downstream 5239 true scaffold_9: 4187186-4192424 Theobroma cacao
Thecc1EG037567 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4190425-4192424 Theobroma cacao
Thecc1EG037567 5.0kb upstream 5.0kb upstream 8239 true scaffold_9: 4182186-4190424 Theobroma cacao
Thecc1EG037567 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4182186-4187185 Theobroma cacao
Thecc1EG037567 5.0kb downstream 5.0kb downstream 8239 true scaffold_9: 4187186-4195424 Theobroma cacao
Thecc1EG037567 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4190425-4195424 Theobroma cacao
Thecc1EG037567 10.0kb upstream 10.0kb upstream 13239 true scaffold_9: 4177186-4190424 Theobroma cacao
Thecc1EG037567 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4177186-4187185 Theobroma cacao
Thecc1EG037567 10.0kb downstream 10.0kb downstream 13239 true scaffold_9: 4187186-4200424 Theobroma cacao
Thecc1EG037567 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4190425-4200424 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832962 5264 Brassicales-Malvales View MSA
124340434 5266 SBM View MSA
124239796 5268 Malvidae View MSA
124068074 5270 Rosid View MSA
123745243 5271 Pentapetalae View MSA
122789986 5272 Eudicot View MSA
122046112 5273 Angiosperm View MSA
121350222 5274 Embryophyte View MSA
123423860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain