Gene : Araha.6824s0002 A. halleri v1.1

Defline:  (1 of 3) KOG3173 - Predicted Zn-finger protein Genomic Order:  2
Name:  ? Araha.6824s0002 Secondary Identifier:  ? PAC:28841021

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6824s0002 0.5kb upstream 0.5kb upstream 1591 true Scaffold6824: 5114-6704 Arabidopsis halleri
Araha.6824s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6824: 6205-6704 Arabidopsis halleri
Araha.6824s0002 0.5kb downstream 0.5kb downstream 1591 true Scaffold6824: 4614-6204 Arabidopsis halleri
Araha.6824s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6824: 4614-5113 Arabidopsis halleri
Araha.6824s0002 1.0kb upstream 1.0kb upstream 2091 true Scaffold6824: 5114-7204 Arabidopsis halleri
Araha.6824s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6824: 6205-7204 Arabidopsis halleri
Araha.6824s0002 1.0kb downstream 1.0kb downstream 2091 true Scaffold6824: 4114-6204 Arabidopsis halleri
Araha.6824s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6824: 4114-5113 Arabidopsis halleri
Araha.6824s0002 2.0kb upstream 2.0kb upstream 3091 true Scaffold6824: 5114-8204 Arabidopsis halleri
Araha.6824s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6824: 6205-8204 Arabidopsis halleri
Araha.6824s0002 2.0kb downstream 2.0kb downstream 3091 true Scaffold6824: 3114-6204 Arabidopsis halleri
Araha.6824s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6824: 3114-5113 Arabidopsis halleri
Araha.6824s0002 5.0kb upstream 5.0kb upstream 6091 true Scaffold6824: 5114-11204 Arabidopsis halleri
Araha.6824s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6824: 6205-11204 Arabidopsis halleri
Araha.6824s0002 5.0kb downstream 5.0kb downstream 6091 true Scaffold6824: 114-6204 Arabidopsis halleri
Araha.6824s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6824: 114-5113 Arabidopsis halleri
Araha.6824s0002 10.0kb upstream 10.0kb upstream 11091 true Scaffold6824: 5114-16204 Arabidopsis halleri
Araha.6824s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6824: 6205-16204 Arabidopsis halleri
Araha.6824s0002 10.0kb downstream 10.0kb downstream 6204 true Scaffold6824: 1-6204 Arabidopsis halleri
Araha.6824s0002 10.0kb downstream 10.0kb downstream 5113 false Scaffold6824: 1-5113 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379987 5261 Brassicaceae View MSA
123839533 5264 Brassicales-Malvales View MSA
124343588 5266 SBM View MSA
124251529 5268 Malvidae View MSA
124064566 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain