Gene : Araha.11756s0049 A. halleri v1.1
Defline:  (1 of 6) PF01176 - Translation initiation factor 1A / IF-1 (eIF-1a) Genomic Order:  49
Name:  ? Araha.11756s0049 Secondary Identifier:  ? PAC:28856385
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0049 0.5kb upstream 0.5kb upstream 719 true Scaffold11756: 73321-74039 Arabidopsis halleri
Araha.11756s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 73321-73820 Arabidopsis halleri
Araha.11756s0049 0.5kb downstream 0.5kb downstream 719 true Scaffold11756: 73821-74539 Arabidopsis halleri
Araha.11756s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 74040-74539 Arabidopsis halleri
Araha.11756s0049 1.0kb upstream 1.0kb upstream 1219 true Scaffold11756: 72821-74039 Arabidopsis halleri
Araha.11756s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 72821-73820 Arabidopsis halleri
Araha.11756s0049 1.0kb downstream 1.0kb downstream 1219 true Scaffold11756: 73821-75039 Arabidopsis halleri
Araha.11756s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 74040-75039 Arabidopsis halleri
Araha.11756s0049 2.0kb upstream 2.0kb upstream 2219 true Scaffold11756: 71821-74039 Arabidopsis halleri
Araha.11756s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 71821-73820 Arabidopsis halleri
Araha.11756s0049 2.0kb downstream 2.0kb downstream 2219 true Scaffold11756: 73821-76039 Arabidopsis halleri
Araha.11756s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 74040-76039 Arabidopsis halleri
Araha.11756s0049 5.0kb upstream 5.0kb upstream 5219 true Scaffold11756: 68821-74039 Arabidopsis halleri
Araha.11756s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 68821-73820 Arabidopsis halleri
Araha.11756s0049 5.0kb downstream 5.0kb downstream 5219 true Scaffold11756: 73821-79039 Arabidopsis halleri
Araha.11756s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 74040-79039 Arabidopsis halleri
Araha.11756s0049 10.0kb upstream 10.0kb upstream 10219 true Scaffold11756: 63821-74039 Arabidopsis halleri
Araha.11756s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 63821-73820 Arabidopsis halleri
Araha.11756s0049 10.0kb downstream 10.0kb downstream 10219 true Scaffold11756: 73821-84039 Arabidopsis halleri
Araha.11756s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 74040-84039 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486882 5273 Angiosperm Singleton cluster - no MSA
122320608 5261 Brassicaceae Singleton cluster - no MSA
123762204 5264 Brassicales-Malvales Singleton cluster - no MSA
124260839 5266 SBM Singleton cluster - no MSA
124117459 5268 Malvidae Singleton cluster - no MSA
123846851 5270 Rosid Singleton cluster - no MSA
123433132 5271 Pentapetalae Singleton cluster - no MSA
122468752 5272 Eudicot Singleton cluster - no MSA
120760276 5274 Embryophyte Singleton cluster - no MSA
122802731 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain