Gene : Araha.11756s0045 A. halleri v1.1
Defline:  (1 of 3) 2.5.1.19 - 3-phosphoshikimate 1-carboxyvinyltransferase / EPSP synthase Genomic Order:  45
Name:  ? Araha.11756s0045 Secondary Identifier:  ? PAC:28856527
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARO-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6163 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0045 0.5kb upstream 0.5kb upstream 1790 true Scaffold11756: 68608-70397 Arabidopsis halleri
Araha.11756s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 69898-70397 Arabidopsis halleri
Araha.11756s0045 0.5kb downstream 0.5kb downstream 1790 true Scaffold11756: 68108-69897 Arabidopsis halleri
Araha.11756s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 68108-68607 Arabidopsis halleri
Araha.11756s0045 1.0kb upstream 1.0kb upstream 2290 true Scaffold11756: 68608-70897 Arabidopsis halleri
Araha.11756s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 69898-70897 Arabidopsis halleri
Araha.11756s0045 1.0kb downstream 1.0kb downstream 2290 true Scaffold11756: 67608-69897 Arabidopsis halleri
Araha.11756s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 67608-68607 Arabidopsis halleri
Araha.11756s0045 2.0kb upstream 2.0kb upstream 3290 true Scaffold11756: 68608-71897 Arabidopsis halleri
Araha.11756s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 69898-71897 Arabidopsis halleri
Araha.11756s0045 2.0kb downstream 2.0kb downstream 3290 true Scaffold11756: 66608-69897 Arabidopsis halleri
Araha.11756s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 66608-68607 Arabidopsis halleri
Araha.11756s0045 5.0kb upstream 5.0kb upstream 6290 true Scaffold11756: 68608-74897 Arabidopsis halleri
Araha.11756s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 69898-74897 Arabidopsis halleri
Araha.11756s0045 5.0kb downstream 5.0kb downstream 6290 true Scaffold11756: 63608-69897 Arabidopsis halleri
Araha.11756s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 63608-68607 Arabidopsis halleri
Araha.11756s0045 10.0kb upstream 10.0kb upstream 11290 true Scaffold11756: 68608-79897 Arabidopsis halleri
Araha.11756s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 69898-79897 Arabidopsis halleri
Araha.11756s0045 10.0kb downstream 10.0kb downstream 11290 true Scaffold11756: 58608-69897 Arabidopsis halleri
Araha.11756s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 58608-68607 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374730 5261 Brassicaceae View MSA
123838473 5264 Brassicales-Malvales View MSA
124341976 5266 SBM View MSA
124237707 5268 Malvidae View MSA
124067523 5270 Rosid View MSA
123738347 5271 Pentapetalae View MSA
122792138 5272 Eudicot View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain