Gene : Araha.11756s0006 A. halleri v1.1

Defline:  (1 of 2) 2.8.1.4//2.8.1.7 - Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  6
Name:  ? Araha.11756s0006 Secondary Identifier:  ? PAC:28856449

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-1021 Arabidopsis halleri pathologic  
Ahalleri PWY-6823 Arabidopsis halleri pathologic  
Ahalleri PWY-7250 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0006 0.5kb upstream 0.5kb upstream 1610 true Scaffold11756: 10989-12598 Arabidopsis halleri
Araha.11756s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 10989-11488 Arabidopsis halleri
Araha.11756s0006 0.5kb downstream 0.5kb downstream 1610 true Scaffold11756: 11489-13098 Arabidopsis halleri
Araha.11756s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 12599-13098 Arabidopsis halleri
Araha.11756s0006 1.0kb upstream 1.0kb upstream 2110 true Scaffold11756: 10489-12598 Arabidopsis halleri
Araha.11756s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 10489-11488 Arabidopsis halleri
Araha.11756s0006 1.0kb downstream 1.0kb downstream 2110 true Scaffold11756: 11489-13598 Arabidopsis halleri
Araha.11756s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 12599-13598 Arabidopsis halleri
Araha.11756s0006 2.0kb upstream 2.0kb upstream 3110 true Scaffold11756: 9489-12598 Arabidopsis halleri
Araha.11756s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 9489-11488 Arabidopsis halleri
Araha.11756s0006 2.0kb downstream 2.0kb downstream 3110 true Scaffold11756: 11489-14598 Arabidopsis halleri
Araha.11756s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 12599-14598 Arabidopsis halleri
Araha.11756s0006 5.0kb upstream 5.0kb upstream 6110 true Scaffold11756: 6489-12598 Arabidopsis halleri
Araha.11756s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 6489-11488 Arabidopsis halleri
Araha.11756s0006 5.0kb downstream 5.0kb downstream 6110 true Scaffold11756: 11489-17598 Arabidopsis halleri
Araha.11756s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 12599-17598 Arabidopsis halleri
Araha.11756s0006 10.0kb upstream 10.0kb upstream 11110 true Scaffold11756: 1489-12598 Arabidopsis halleri
Araha.11756s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 1489-11488 Arabidopsis halleri
Araha.11756s0006 10.0kb downstream 10.0kb downstream 11110 true Scaffold11756: 11489-22598 Arabidopsis halleri
Araha.11756s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 12599-22598 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486936 5273 Angiosperm Singleton cluster - no MSA
122320662 5261 Brassicaceae Singleton cluster - no MSA
123762258 5264 Brassicales-Malvales Singleton cluster - no MSA
124260893 5266 SBM Singleton cluster - no MSA
124117513 5268 Malvidae Singleton cluster - no MSA
123846905 5270 Rosid Singleton cluster - no MSA
123433186 5271 Pentapetalae Singleton cluster - no MSA
122468806 5272 Eudicot Singleton cluster - no MSA
120760329 5274 Embryophyte Singleton cluster - no MSA
122802781 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain