Gene : Araha.5854s0009 A. halleri v1.1

Defline:  (1 of 1) PTHR34568:SF2 - DNA BINDING PROTEIN Genomic Order:  9
Name:  ? Araha.5854s0009 Secondary Identifier:  ? PAC:28841769

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5854s0009 0.5kb upstream 0.5kb upstream 3110 true Scaffold5854: 24876-27985 Arabidopsis halleri
Araha.5854s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5854: 27486-27985 Arabidopsis halleri
Araha.5854s0009 0.5kb downstream 0.5kb downstream 3110 true Scaffold5854: 24376-27485 Arabidopsis halleri
Araha.5854s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5854: 24376-24875 Arabidopsis halleri
Araha.5854s0009 1.0kb upstream 1.0kb upstream 3610 true Scaffold5854: 24876-28485 Arabidopsis halleri
Araha.5854s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5854: 27486-28485 Arabidopsis halleri
Araha.5854s0009 1.0kb downstream 1.0kb downstream 3610 true Scaffold5854: 23876-27485 Arabidopsis halleri
Araha.5854s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5854: 23876-24875 Arabidopsis halleri
Araha.5854s0009 2.0kb upstream 2.0kb upstream 4520 true Scaffold5854: 24876-29395 Arabidopsis halleri
Araha.5854s0009 2.0kb upstream 2.0kb upstream 1910 false Scaffold5854: 27486-29395 Arabidopsis halleri
Araha.5854s0009 2.0kb downstream 2.0kb downstream 4610 true Scaffold5854: 22876-27485 Arabidopsis halleri
Araha.5854s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5854: 22876-24875 Arabidopsis halleri
Araha.5854s0009 5.0kb upstream 5.0kb upstream 4520 true Scaffold5854: 24876-29395 Arabidopsis halleri
Araha.5854s0009 5.0kb upstream 5.0kb upstream 1910 false Scaffold5854: 27486-29395 Arabidopsis halleri
Araha.5854s0009 5.0kb downstream 5.0kb downstream 7610 true Scaffold5854: 19876-27485 Arabidopsis halleri
Araha.5854s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold5854: 19876-24875 Arabidopsis halleri
Araha.5854s0009 10.0kb upstream 10.0kb upstream 4520 true Scaffold5854: 24876-29395 Arabidopsis halleri
Araha.5854s0009 10.0kb upstream 10.0kb upstream 1910 false Scaffold5854: 27486-29395 Arabidopsis halleri
Araha.5854s0009 10.0kb downstream 10.0kb downstream 12610 true Scaffold5854: 14876-27485 Arabidopsis halleri
Araha.5854s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold5854: 14876-24875 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026775 5273 Angiosperm View MSA
122367103 5261 Brassicaceae View MSA
123839775 5264 Brassicales-Malvales View MSA
124345492 5266 SBM View MSA
124240701 5268 Malvidae View MSA
124060685 5270 Rosid View MSA
123752570 5271 Pentapetalae View MSA
122794894 5272 Eudicot View MSA
121296550 5274 Embryophyte View MSA
123334696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain