Gene : Araha.5811s0004 A. halleri v1.1
Defline:  (1 of 2) PTHR22572:SF111 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC-RELATED Genomic Order:  4
Name:  ? Araha.5811s0004 Secondary Identifier:  ? PAC:28860381
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYCOGENSYNTH-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-622 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5811s0004 0.5kb upstream 0.5kb upstream 4120 true Scaffold5811: 8632-12751 Arabidopsis halleri
Araha.5811s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5811: 12252-12751 Arabidopsis halleri
Araha.5811s0004 0.5kb downstream 0.5kb downstream 4120 true Scaffold5811: 8132-12251 Arabidopsis halleri
Araha.5811s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5811: 8132-8631 Arabidopsis halleri
Araha.5811s0004 1.0kb upstream 1.0kb upstream 4620 true Scaffold5811: 8632-13251 Arabidopsis halleri
Araha.5811s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5811: 12252-13251 Arabidopsis halleri
Araha.5811s0004 1.0kb downstream 1.0kb downstream 4620 true Scaffold5811: 7632-12251 Arabidopsis halleri
Araha.5811s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5811: 7632-8631 Arabidopsis halleri
Araha.5811s0004 2.0kb upstream 2.0kb upstream 5620 true Scaffold5811: 8632-14251 Arabidopsis halleri
Araha.5811s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5811: 12252-14251 Arabidopsis halleri
Araha.5811s0004 2.0kb downstream 2.0kb downstream 5620 true Scaffold5811: 6632-12251 Arabidopsis halleri
Araha.5811s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5811: 6632-8631 Arabidopsis halleri
Araha.5811s0004 5.0kb upstream 5.0kb upstream 6721 true Scaffold5811: 8632-15352 Arabidopsis halleri
Araha.5811s0004 5.0kb upstream 5.0kb upstream 3101 false Scaffold5811: 12252-15352 Arabidopsis halleri
Araha.5811s0004 5.0kb downstream 5.0kb downstream 8620 true Scaffold5811: 3632-12251 Arabidopsis halleri
Araha.5811s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5811: 3632-8631 Arabidopsis halleri
Araha.5811s0004 10.0kb upstream 10.0kb upstream 6721 true Scaffold5811: 8632-15352 Arabidopsis halleri
Araha.5811s0004 10.0kb upstream 10.0kb upstream 3101 false Scaffold5811: 12252-15352 Arabidopsis halleri
Araha.5811s0004 10.0kb downstream 10.0kb downstream 12251 true Scaffold5811: 1-12251 Arabidopsis halleri
Araha.5811s0004 10.0kb downstream 10.0kb downstream 8631 false Scaffold5811: 1-8631 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360349 5261 Brassicaceae View MSA
123840565 5264 Brassicales-Malvales View MSA
124339293 5266 SBM View MSA
124254381 5268 Malvidae View MSA
124063067 5270 Rosid View MSA
123736648 5271 Pentapetalae View MSA
122795851 5272 Eudicot View MSA
122049948 5273 Angiosperm View MSA
121348030 5274 Embryophyte View MSA
123424085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain