Gene : Araha.12053s0008 A. halleri v1.1

Defline:  (1 of 1) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  8
Name:  ? Araha.12053s0008 Secondary Identifier:  ? PAC:28840124

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3561 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12053s0008 0.5kb upstream 0.5kb upstream 4535 true Scaffold12053: 40176-44710 Arabidopsis halleri
Araha.12053s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold12053: 40176-40675 Arabidopsis halleri
Araha.12053s0008 0.5kb downstream 0.5kb downstream 4535 true Scaffold12053: 40676-45210 Arabidopsis halleri
Araha.12053s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold12053: 44711-45210 Arabidopsis halleri
Araha.12053s0008 1.0kb upstream 1.0kb upstream 5035 true Scaffold12053: 39676-44710 Arabidopsis halleri
Araha.12053s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold12053: 39676-40675 Arabidopsis halleri
Araha.12053s0008 1.0kb downstream 1.0kb downstream 5035 true Scaffold12053: 40676-45710 Arabidopsis halleri
Araha.12053s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold12053: 44711-45710 Arabidopsis halleri
Araha.12053s0008 2.0kb upstream 2.0kb upstream 6035 true Scaffold12053: 38676-44710 Arabidopsis halleri
Araha.12053s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold12053: 38676-40675 Arabidopsis halleri
Araha.12053s0008 2.0kb downstream 2.0kb downstream 6035 true Scaffold12053: 40676-46710 Arabidopsis halleri
Araha.12053s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold12053: 44711-46710 Arabidopsis halleri
Araha.12053s0008 5.0kb upstream 5.0kb upstream 9035 true Scaffold12053: 35676-44710 Arabidopsis halleri
Araha.12053s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold12053: 35676-40675 Arabidopsis halleri
Araha.12053s0008 5.0kb downstream 5.0kb downstream 9035 true Scaffold12053: 40676-49710 Arabidopsis halleri
Araha.12053s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold12053: 44711-49710 Arabidopsis halleri
Araha.12053s0008 10.0kb upstream 10.0kb upstream 14035 true Scaffold12053: 30676-44710 Arabidopsis halleri
Araha.12053s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold12053: 30676-40675 Arabidopsis halleri
Araha.12053s0008 10.0kb downstream 10.0kb downstream 14035 true Scaffold12053: 40676-54710 Arabidopsis halleri
Araha.12053s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold12053: 44711-54710 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373101 5261 Brassicaceae View MSA
123831144 5264 Brassicales-Malvales View MSA
124343359 5266 SBM View MSA
124240959 5268 Malvidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain