Gene : Araha.12053s0007 A. halleri v1.1

Defline:  (1 of 1) PTHR19376:SF37 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 Genomic Order:  7
Name:  ? Araha.12053s0007 Secondary Identifier:  ? PAC:28840109

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12053s0007 0.5kb upstream 0.5kb upstream 8088 true Scaffold12053: 31380-39467 Arabidopsis halleri
Araha.12053s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold12053: 31380-31879 Arabidopsis halleri
Araha.12053s0007 0.5kb downstream 0.5kb downstream 8088 true Scaffold12053: 31880-39967 Arabidopsis halleri
Araha.12053s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold12053: 39468-39967 Arabidopsis halleri
Araha.12053s0007 1.0kb upstream 1.0kb upstream 8588 true Scaffold12053: 30880-39467 Arabidopsis halleri
Araha.12053s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold12053: 30880-31879 Arabidopsis halleri
Araha.12053s0007 1.0kb downstream 1.0kb downstream 8588 true Scaffold12053: 31880-40467 Arabidopsis halleri
Araha.12053s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold12053: 39468-40467 Arabidopsis halleri
Araha.12053s0007 2.0kb upstream 2.0kb upstream 9588 true Scaffold12053: 29880-39467 Arabidopsis halleri
Araha.12053s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold12053: 29880-31879 Arabidopsis halleri
Araha.12053s0007 2.0kb downstream 2.0kb downstream 9588 true Scaffold12053: 31880-41467 Arabidopsis halleri
Araha.12053s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold12053: 39468-41467 Arabidopsis halleri
Araha.12053s0007 5.0kb upstream 5.0kb upstream 12588 true Scaffold12053: 26880-39467 Arabidopsis halleri
Araha.12053s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold12053: 26880-31879 Arabidopsis halleri
Araha.12053s0007 5.0kb downstream 5.0kb downstream 12588 true Scaffold12053: 31880-44467 Arabidopsis halleri
Araha.12053s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold12053: 39468-44467 Arabidopsis halleri
Araha.12053s0007 10.0kb upstream 10.0kb upstream 17588 true Scaffold12053: 21880-39467 Arabidopsis halleri
Araha.12053s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold12053: 21880-31879 Arabidopsis halleri
Araha.12053s0007 10.0kb downstream 10.0kb downstream 17588 true Scaffold12053: 31880-49467 Arabidopsis halleri
Araha.12053s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold12053: 39468-49467 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
122367215 5261 Brassicaceae View MSA
123829151 5264 Brassicales-Malvales View MSA
124338687 5266 SBM View MSA
124237204 5268 Malvidae View MSA
124064405 5270 Rosid View MSA
123740882 5271 Pentapetalae View MSA
122790504 5272 Eudicot View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain