Gene : Araha.11756s0336 A. halleri v1.1

Defline:  (1 of 2) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  336
Name:  ? Araha.11756s0336 Secondary Identifier:  ? PAC:28856616

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0336 0.5kb upstream 0.5kb upstream 3223 true Scaffold11756: 483603-486825 Arabidopsis halleri
Araha.11756s0336 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 486326-486825 Arabidopsis halleri
Araha.11756s0336 0.5kb downstream 0.5kb downstream 3223 true Scaffold11756: 483103-486325 Arabidopsis halleri
Araha.11756s0336 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 483103-483602 Arabidopsis halleri
Araha.11756s0336 1.0kb upstream 1.0kb upstream 3723 true Scaffold11756: 483603-487325 Arabidopsis halleri
Araha.11756s0336 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 486326-487325 Arabidopsis halleri
Araha.11756s0336 1.0kb downstream 1.0kb downstream 3723 true Scaffold11756: 482603-486325 Arabidopsis halleri
Araha.11756s0336 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 482603-483602 Arabidopsis halleri
Araha.11756s0336 2.0kb upstream 2.0kb upstream 4723 true Scaffold11756: 483603-488325 Arabidopsis halleri
Araha.11756s0336 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 486326-488325 Arabidopsis halleri
Araha.11756s0336 2.0kb downstream 2.0kb downstream 4723 true Scaffold11756: 481603-486325 Arabidopsis halleri
Araha.11756s0336 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 481603-483602 Arabidopsis halleri
Araha.11756s0336 5.0kb upstream 5.0kb upstream 7723 true Scaffold11756: 483603-491325 Arabidopsis halleri
Araha.11756s0336 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 486326-491325 Arabidopsis halleri
Araha.11756s0336 5.0kb downstream 5.0kb downstream 7723 true Scaffold11756: 478603-486325 Arabidopsis halleri
Araha.11756s0336 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 478603-483602 Arabidopsis halleri
Araha.11756s0336 10.0kb upstream 10.0kb upstream 12723 true Scaffold11756: 483603-496325 Arabidopsis halleri
Araha.11756s0336 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 486326-496325 Arabidopsis halleri
Araha.11756s0336 10.0kb downstream 10.0kb downstream 12723 true Scaffold11756: 473603-486325 Arabidopsis halleri
Araha.11756s0336 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 473603-483602 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487064 5273 Angiosperm Singleton cluster - no MSA
122320794 5261 Brassicaceae Singleton cluster - no MSA
123762389 5264 Brassicales-Malvales Singleton cluster - no MSA
124261024 5266 SBM Singleton cluster - no MSA
124117644 5268 Malvidae Singleton cluster - no MSA
123847035 5270 Rosid Singleton cluster - no MSA
123433315 5271 Pentapetalae Singleton cluster - no MSA
122468935 5272 Eudicot Singleton cluster - no MSA
120760454 5274 Embryophyte Singleton cluster - no MSA
123427465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain